DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp29Fb and Tspan11

DIOPT Version :10

Sequence 1:NP_523516.1 Gene:Tsp29Fb / 34212 FlyBaseID:FBgn0032075 Length:308 Species:Drosophila melanogaster
Sequence 2:NP_081019.1 Gene:Tspan11 / 68498 MGIID:1915748 Length:253 Species:Mus musculus


Alignment Length:237 Identity:57/237 - (24%)
Similarity:105/237 - (44%) Gaps:7/237 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 KYMLIIVSFMFALTAILLIMVGT-TIQTIFGDFSLFIDGHFSSPPALLIAIGFILIAVAALGAYG 79
            ||:|.|.:|.|.:....::.||. |:....|..|:.....|::...:||.:|.:::....||...
Mouse    17 KYLLFIFNFFFWVGGAAVMAVGIWTLVEKSGYLSILASSTFAASAYILIFVGGLVMTTGFLGFGA 81

  Fly    80 AVKESVMVINLYGVCLFLVFILEVSAAIAAFVMQSQVRGMLIRTMNQALAEYEHDP---YVESGV 141
            .::|....::.|...|.::|::|:.|.:.|.|...::...|...:|..|.|:...|   .:.:.|
Mouse    82 IIREQKSCLSTYFCLLLVIFLVELVAGVLAHVYYQRLSDELKWHLNSTLTEHYGQPRAAEITASV 146

  Fly   142 DFMQSMLECCGVNEPEDWKDYLSANVNFTLGVDDVVVPNSCCGNQPTSLNDSTQMTCMETYDYGC 206
            |.:|...:|||.|...||:..........||..   ||:|||.............:.:...:.||
Mouse   147 DRLQQDFKCCGSNSSADWQHSAYILSQEALGRQ---VPDSCCKTVVARCGQRAHPSNIYKVEGGC 208

  Fly   207 FRKMNFIVSQSAMLIATGATTVAFVQLLGVLCAFMLAKTLRR 248
            ..|:...|:...:|:......||.:|:.|::....|.:.|::
Mouse   209 MAKLEQFVADHLLLMGAVGIGVACLQICGMVLTCCLHRRLQQ 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp29FbNP_523516.1 Tetraspanin 16..244 CDD:459767 56/231 (24%)
tetraspanin_LEL 109..210 CDD:351888 25/103 (24%)
Tspan11NP_081019.1 Tetraspanin 16..244 CDD:459767 55/229 (24%)
CD151_like_LEL 112..220 CDD:239408 26/110 (24%)

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