DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp29Fb and Tspan15

DIOPT Version :10

Sequence 1:NP_523516.1 Gene:Tsp29Fb / 34212 FlyBaseID:FBgn0032075 Length:308 Species:Drosophila melanogaster
Sequence 2:NP_001108504.1 Gene:Tspan15 / 679462 RGDID:1588304 Length:294 Species:Rattus norvegicus


Alignment Length:264 Identity:59/264 - (22%)
Similarity:110/264 - (41%) Gaps:42/264 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 KYMLIIVSFMFALTAILLIMVGTTIQTIFGDFSLFIDGHFSSPPALLIAIGFILIAVAALGAYGA 80
            |:.|||.|.:|.|...|::.||...:.....:.. ::..|.:|..:||.:|.::..|:.:|...:
  Rat    21 KFSLIIYSTVFWLIGGLVLSVGIYAEAERQKYKT-LESAFLAPAIILILLGVVMFIVSFIGVLAS 84

  Fly    81 VKESVMVINLYGVCLFLVFILEVSAAIAAFVMQSQVRGMLIRTMNQALAEYEHDPYVESGVDFMQ 145
            :::::.::..:...|.|..::|:...|.|.:.::|....|...:.:.:..|..|...::.:||:|
  Rat    85 LRDNLCLLQSFMFILGLCLVMELIGGIVALIFRNQTIDFLNDNIRRGIENYYDDLDFKNIMDFVQ 149

  Fly   146 SMLECCGVNEPEDW--KDYLSANVNFTLGVDDVVVPNSCCGNQPTSLNDSTQMTCMETYDYGCFR 208
            ...:|||..:..||  ..|...:....|...   ||.:||....|.:.::  |...:|.|.....
  Rat   150 KKFKCCGGEDYRDWSKNQYHDCSAPGPLACG---VPYTCCIRNTTDVVNT--MCGYKTIDKERLN 209

  Fly   209 KMNFIVSQSAMLIATGATTVAFVQ--------LLGVLCAFMLAKTLRRNKSIREARRWQLQQSLG 265
            ..|.|..:.    .|.|..:.|:.        |||:|                      |.|.||
  Rat   210 AQNIIHVRG----CTNAVLIWFMDNYSIMAGLLLGIL----------------------LPQFLG 248

  Fly   266 VLIS 269
            ||::
  Rat   249 VLLT 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp29FbNP_523516.1 Tetraspanin 16..244 CDD:459767 53/237 (22%)
tetraspanin_LEL 109..210 CDD:351888 23/102 (23%)
Tspan15NP_001108504.1 Tetraspanin 20..>157 CDD:459767 31/136 (23%)
penumbra_like_LEL 114..231 CDD:239411 27/125 (22%)

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