DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp29Fb and Tspan31

DIOPT Version :10

Sequence 1:NP_523516.1 Gene:Tsp29Fb / 34212 FlyBaseID:FBgn0032075 Length:308 Species:Drosophila melanogaster
Sequence 2:NP_080258.1 Gene:Tspan31 / 67125 MGIID:1914375 Length:210 Species:Mus musculus


Alignment Length:245 Identity:56/245 - (22%)
Similarity:93/245 - (37%) Gaps:46/245 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 GMKCAKYMLIIVSFMFALTAILLIMVGTTIQTIFGDFSLFIDGHFSSPPALLIAIGFILIAVAAL 75
            |..|::..|..::.::.|...|||.|....:.:....|:.|.|.       :||:|..|:.:|..
Mouse     5 GFACSRNALCALNVVYMLVGFLLIGVAAWGKGLGVVSSIHIIGG-------VIAVGVFLLLIAVA 62

  Fly    76 GAYGAVKESVMVINLYGVCLFLVFILEVSAAIAAFVMQSQVRGMLIRTMNQALA-EYEHDPYVES 139
            |..||.....:::..|.:.|.||||.:...:.:...:....:..:|......|: ...|:     
Mouse    63 GLVGAANHHQVLLFFYMIILGLVFIFQFGISCSCLAINRNTQADVINASWSVLSNSTRHE----- 122

  Fly   140 GVDFMQSMLECCGVNEPEDWKDYLSANVNFTLGVDDVVVPNSCCGNQPTSLNDSTQMTCMETYDY 204
                ::...:|||:           .|:. ||.:.|....::.|     ....||...|.|.   
Mouse   123 ----LERSFDCCGL-----------FNLT-TLRLQDDTSCSAVC-----KTKSSTCQMCGER--- 163

  Fly   205 GCFRKMNFIVSQSAMLIATG-ATTVAFVQLLGVLCA--FMLAKTLRRNKS 251
              |.|.    |..|:.|..| ....:|.::|||..|  |...|..|.|.|
Mouse   164 --FLKH----SDKALKILGGVGLFFSFTEILGVWLAMRFRNQKDPRANPS 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp29FbNP_523516.1 Tetraspanin 16..244 CDD:459767 50/231 (22%)
tetraspanin_LEL 109..210 CDD:351888 16/101 (16%)
Tspan31NP_080258.1 Tetraspanin 9..196 CDD:459767 49/228 (21%)

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