DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp29Fb and Tspan13

DIOPT Version :10

Sequence 1:NP_523516.1 Gene:Tsp29Fb / 34212 FlyBaseID:FBgn0032075 Length:308 Species:Drosophila melanogaster
Sequence 2:NP_079635.1 Gene:Tspan13 / 66109 MGIID:1913359 Length:204 Species:Mus musculus


Alignment Length:256 Identity:66/256 - (25%)
Similarity:98/256 - (38%) Gaps:74/256 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 GMKCAKYMLIIVSFMFALTAILLIMVGTTIQTI-FGDF-SLFIDGHFSSPPALLIAIGFILIAVA 73
            |..|:|..|..::.::.|.::|||  |.....| ||.. ||.:.|       ::||:|..|..:|
Mouse     5 GFSCSKNCLCALNLLYTLVSLLLI--GIAAWGIGFGLISSLRVVG-------VVIAVGIFLFLIA 60

  Fly    74 ALGAYGAVKESVMVINLYGVCLFLVFILEVSAAIAAFVMQSQVRGMLIRTMNQALAEYEHDPYVE 138
            .:|..||||...:::..|.:.|.||||::.|.:.|...:..:.:|.|:.......|...:|    
Mouse    61 LVGLIGAVKHHQVLLFFYMIILLLVFIVQFSVSCACLALNREQQGQLLEVGWNNTASARND---- 121

  Fly   139 SGVDFMQSMLECCGVNEPEDWKDYLSANVNFTLGVDDVVVPNSCCGNQPTSLNDSTQMTCMETYD 203
                 :|..|.|||         :.|.|            ||..|   |.|...|||.       
Mouse   122 -----IQRNLNCCG---------FRSYN------------PNDTC---PASCAKSTQK------- 150

  Fly   204 YGCFRKMNFIVSQSAMLIATGATTV-----------AFVQLLGVLCAFML--AKTLRRNKS 251
              |        |..|.:|...|..|           :|.::|||...:..  .|..|.|.|
Mouse   151 --C--------SSCAPIIGEYAGEVLRFVGGIGLFFSFTEILGVWLTYRYRNQKDPRANPS 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp29FbNP_523516.1 Tetraspanin 16..244 CDD:459767 60/242 (25%)
tetraspanin_LEL 109..210 CDD:351888 20/100 (20%)
Tspan13NP_079635.1 Tetraspanin <55..190 CDD:459767 44/184 (24%)

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