DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp29Fb and Cd151

DIOPT Version :10

Sequence 1:NP_523516.1 Gene:Tsp29Fb / 34212 FlyBaseID:FBgn0032075 Length:308 Species:Drosophila melanogaster
Sequence 2:NP_071968.1 Gene:Cd151 / 64315 RGDID:621290 Length:253 Species:Rattus norvegicus


Alignment Length:249 Identity:61/249 - (24%)
Similarity:109/249 - (43%) Gaps:11/249 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ELQLNSGMKCAKYMLIIVSFMFALTAILLIMVGTTIQTIFGDF-SLFIDGHFSSPPALLIAIGFI 68
            |.:...|..|.||:|...:..|.|..:.::.||.....:..|: ||.....:.:...:|:..|.:
  Rat     6 EKKATCGTVCLKYLLFTYNCCFWLAGLAVMAVGIWTLALKSDYISLLASSTYLATAYILVVAGVV 70

  Fly    69 LIAVAALGAYGAVKESVMVINLYGVCLFLVFILEVSAAIAAFVMQSQVRGMLIRTMNQALAEYEH 133
            ::....||.....||...::.||.:.|.::|:||:.|.|.|:|...|:...|...:...:.:..|
  Rat    71 VMVTGVLGCCATFKERRNLLRLYFILLLIIFLLEIIAGILAYVYYQQLNTELKENLKDTMIKRYH 135

  Fly   134 D---PYVESGVDFMQSMLECCGVNEPEDWKD--YLSANVNFTLGVDDVVVPNSCCGNQPTSLNDS 193
            .   ..|.:.||.:|....|||.|...||:|  ::.:.     ..|..|||:|||....|.....
  Rat   136 QSGHEGVTNAVDKLQQEFHCCGSNNSRDWRDSEWIRSG-----EADSRVVPDSCCKTVVTGCGKR 195

  Fly   194 TQMTCMETYDYGCFRKMNFIVSQSAMLIATGATTVAFVQLLGVLCAFMLAKTLR 247
            ...:.:...:.||..|:...:.:...:|......:|.||:.|::....|.::|:
  Rat   196 EHASNIYKVEGGCITKLESFIQEHLRVIGAVGIGIACVQVFGMIFTCCLYRSLK 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp29FbNP_523516.1 Tetraspanin 16..244 CDD:459767 57/233 (24%)
tetraspanin_LEL 109..210 CDD:351888 26/105 (25%)
Cd151NP_071968.1 Tetraspanin 16..246 CDD:459767 57/234 (24%)
CD151_like_LEL 112..220 CDD:239408 26/112 (23%)

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