DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp29Fb and PRPH2

DIOPT Version :10

Sequence 1:NP_523516.1 Gene:Tsp29Fb / 34212 FlyBaseID:FBgn0032075 Length:308 Species:Drosophila melanogaster
Sequence 2:NP_000313.2 Gene:PRPH2 / 5961 HGNCID:9942 Length:346 Species:Homo sapiens


Alignment Length:324 Identity:66/324 - (20%)
Similarity:120/324 - (37%) Gaps:109/324 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 LIIVSFMFALTAILLIMVGTTIQTIF---GDFSLFIDGHFSSPPALLIAIGFILIAVAALG---A 77
            |.::::...|..|::..:|..::...   .|.....:.||  .|..||.:|.:.....:|.   .
Human    20 LWLMNWFSVLAGIIIFSLGLFLKIELRKRSDVMNNSESHF--VPNSLIGMGVLSCVFNSLAGKIC 82

  Fly    78 YGA------------VKESVMVINLYGVCLFLVFILEVSAAIAAFVMQSQVRGMLIRTMNQAL-- 128
            |.|            :|..:.:..|:.:.||||       |:..|::    ||.|..|:.|.|  
Human    83 YDALDPAKYARWKPWLKPYLAICVLFNIILFLV-------ALCCFLL----RGSLENTLGQGLKN 136

  Fly   129 -AEYEHDP------YVESGVDFMQSMLECCGVNEPEDW------------------KDYLSANVN 168
             .:|..|.      :::..:|.:|...:|||.|...||                  ||.:.:||:
Human   137 GMKYYRDTDTPGRCFMKKTIDMLQIEFKCCGNNGFRDWFEIQWISNRYLDFSSKEVKDRIKSNVD 201

  Fly   169 FTLGVDDVVVPNSCCGNQPTSLNDSTQMTCME----------TYDY----------GCFRKMNFI 213
            ....||.  ||.|||       |.|:...|::          :||:          ||  :...:
Human   202 GRYLVDG--VPFSCC-------NPSSPRPCIQYQITNNSAHYSYDHQTEELNLWVRGC--RAALL 255

  Fly   214 VSQSAMLIATGATTVAFVQLLGVLCAFMLAKTL-------------RRNKSIREARRWQLQQSL 264
            ...|:::.:.|..|:       ::..|.:..|:             ...:|..|::.|.|::|:
Human   256 SYYSSLMNSMGVVTL-------LIWLFEVTITIGLRYLQTSLDGVSNPEESESESQGWLLERSV 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp29FbNP_523516.1 Tetraspanin 16..244 CDD:459767 60/289 (21%)
tetraspanin_LEL 109..210 CDD:351888 35/147 (24%)
PRPH2NP_000313.2 Tetraspanin 16..181 CDD:459767 38/173 (22%)
peripherin_like_LEL 120..262 CDD:239415 36/156 (23%)
Interaction with MREG. /evidence=ECO:0000250 341..346
Blue background indicates that the domain is not in the aligned region.

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