DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp29Fb and prph2a

DIOPT Version :10

Sequence 1:NP_523516.1 Gene:Tsp29Fb / 34212 FlyBaseID:FBgn0032075 Length:308 Species:Drosophila melanogaster
Sequence 2:NP_571641.1 Gene:prph2a / 58085 ZFINID:ZDB-GENE-000616-8 Length:345 Species:Danio rerio


Alignment Length:286 Identity:67/286 - (23%)
Similarity:112/286 - (39%) Gaps:73/286 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ELQLNSGMKCAKYMLIIVSFMFALTAILLIMVGTTIQTIFGDFSLFID---GHFSSPPALLIAIG 66
            :..|...:|.|: ||.::.:...:..:|:..:|...:......|..:|   .||  .|.:||.:|
Zfish     7 KFDLKKRVKLAQ-MLWLMYWFSVMAGVLVFSMGLFFKIELRKRSELMDNNESHF--VPNILIGVG 68

  Fly    67 FILIAVAALG---AYGAVK-------ESVMVINLYGVCLFLVFILEVSAAIAAFVMQSQVRGMLI 121
            .:...:.|.|   .|.::.       :|:|...|. .||...|:|.|:||: .|.|:..:...|.
Zfish    69 LLACCLNAFGGKVCYDSLDSSKYAKWKSIMTPFLI-CCLVFNFLLIVTAAM-CFAMRIPLEFTLA 131

  Fly   122 RTMNQALAEYEHDP-----YVESGVDFMQSMLECCGVNEPEDW------------------KDYL 163
            ..:...:..|:...     |::..:|.||....|||.|..:||                  ||.:
Zfish   132 EGLKNGMKYYKDTDTPGRCYMKRTLDLMQMEFRCCGNNNYKDWFEIQWVSNRYLDFSAKEVKDRI 196

  Fly   164 SANVNFTLGVDDVVVPNSCCGNQPTSLNDSTQMTCME----------TYDY----------GCFR 208
            |:||:....:|.  ||.|||       |.|:...|::          :||:          ||  
Zfish   197 SSNVDGKYLMDG--VPFSCC-------NPSSPRPCIQQQITNNSAHYSYDHYTEDLNIWKRGC-- 250

  Fly   209 KMNFIVSQSAMLIATGATTVAFVQLL 234
             .:.:||....::.|....|..|.||
Zfish   251 -RDALVSYYGGMMNTIGVLVLLVTLL 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp29FbNP_523516.1 Tetraspanin 16..244 CDD:459767 64/275 (23%)
tetraspanin_LEL 109..210 CDD:351888 32/143 (22%)
prph2aNP_571641.1 Tetraspanin 16..>167 CDD:459767 35/155 (23%)
peripherin_like_LEL 120..262 CDD:239415 34/153 (22%)

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