DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp29Fb and tspan11

DIOPT Version :10

Sequence 1:NP_523516.1 Gene:Tsp29Fb / 34212 FlyBaseID:FBgn0032075 Length:308 Species:Drosophila melanogaster
Sequence 2:XP_005164709.1 Gene:tspan11 / 564029 ZFINID:ZDB-GENE-041210-93 Length:260 Species:Danio rerio


Alignment Length:242 Identity:63/242 - (26%)
Similarity:114/242 - (47%) Gaps:17/242 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 CAKYMLIIVSFMFALTAILLIMVGTTIQTIFGDF-SLFIDGHFSSPPALLIAIGFILIAVAALGA 77
            |.||:|.:.:|:|.:...:::.||.......|:: ||.....|:....:||..|.:::....||.
Zfish    16 CLKYLLFVFNFLFWMGGGVVMGVGIWTLVDKGEYLSLLASSTFAVSAYILILAGGLVMVTGFLGC 80

  Fly    78 YGAVKESVMVINLYGVCLFLVFILEVSAAIAAFV----MQSQVRGMLIRTMNQALAEYEHDPYVE 138
            ...::|....::.|..||.|:|::|:.|.:.|:|    :..:::..|.:||.:..|:...:...:
Zfish    81 CAVIREQRSCLSTYFSCLLLIFLIELVAGVLAYVYYQALSEELKQHLSKTMMENYAQPGKESITQ 145

  Fly   139 SGVDFMQSMLECCGVNEPEDWKD--YLSANVNFTLGVDDVVVPNSCCGNQPTSLNDSTQMTCMET 201
            | ||.:|...:|||.|...||..  |:.:.     ..|..|||:|||.............:.:..
Zfish   146 S-VDRLQQDFKCCGSNNSLDWMHSVYIMSQ-----AADSRVVPDSCCKTITPQCGRRDHPSNIYK 204

  Fly   202 YDYGCFRKMNFIVSQSAMLIATGATTVAFVQLLG-VLCA---FMLAK 244
            .:.||..|:...::...::|......||.:||:| ||.|   ::|.|
Zfish   205 VEGGCITKLEQFLADHLLIIGAVGIGVACLQLIGAVLTACFIYLLYK 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp29FbNP_523516.1 Tetraspanin 16..244 CDD:459767 61/238 (26%)
tetraspanin_LEL 109..210 CDD:351888 26/106 (25%)
tspan11XP_005164709.1 Tetraspanin 17..246 CDD:459767 60/234 (26%)
CD151_like_LEL 113..221 CDD:239408 26/113 (23%)

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