DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp29Fb and Tspan5

DIOPT Version :10

Sequence 1:NP_523516.1 Gene:Tsp29Fb / 34212 FlyBaseID:FBgn0032075 Length:308 Species:Drosophila melanogaster
Sequence 2:XP_006501799.1 Gene:Tspan5 / 56224 MGIID:1928096 Length:311 Species:Mus musculus


Alignment Length:249 Identity:55/249 - (22%)
Similarity:106/249 - (42%) Gaps:30/249 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 MKCAKYMLIIVSFMFALTAILLIMVGTTIQTIFGDFSLFID-GHFSSPPALLIAIGFILIAVAAL 75
            ::.|::::.|.|....:|.:.:.:.....:.:..:.|...| |.| .|..|.:.:|.::..:...
Mouse    58 LRTAEFLVRIHSHFLGITFLGIGLWAWNEKGVLSNISSITDLGGF-DPVWLFLVVGGVMFILGFA 121

  Fly    76 GAYGAVKESVMVINLYGVCLFLVFILEVSAAIAAFVMQSQVRGMLIRTMNQALAEYEHDPYVESG 140
            |..||::|:..::..:.|.|.::|.||::|.:.|||.:..::..|...:|..:..|..|..:::.
Mouse   122 GCIGALRENTFLLKFFSVFLGIIFFLELTAGVLAFVFKDWIKDQLYFFINNNIRAYRDDIDLQNL 186

  Fly   141 VDFMQSMLECCGVNEPEDWKDYLSANVNFTLGVDD-------VVVPNSCCGNQPTSLNDSTQMTC 198
            :||.|...:|||....:||      |:|......|       ..||.|||...|.  .|.....|
Mouse   187 IDFTQEYWQCCGAFGADDW------NLNIYFNCTDSNASRERCGVPFSCCTKDPA--EDVINTQC 243

  Fly   199 -------------METYDYGCFRKMNFIVSQSAMLIATGATTVAFVQLLGVLCA 239
                         :..|..||..:....:..:..::|.....:|.:|:.|:..|
Mouse   244 GYDARQKPEVDQQIVIYTKGCVPQFEKWLQDNLTIVAGIFIGIALLQIFGICLA 297

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp29FbNP_523516.1 Tetraspanin 16..244 CDD:459767 54/245 (22%)
tetraspanin_LEL 109..210 CDD:351888 29/120 (24%)
Tspan5XP_006501799.1 Tetraspanin 72..301 CDD:459767 52/235 (22%)
TM4SF9_like_LEL 156..276 CDD:239412 28/127 (22%)

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