DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp29Fb and cd63

DIOPT Version :10

Sequence 1:NP_523516.1 Gene:Tsp29Fb / 34212 FlyBaseID:FBgn0032075 Length:308 Species:Drosophila melanogaster
Sequence 2:NP_001016413.1 Gene:cd63 / 549167 XenbaseID:XB-GENE-1015227 Length:238 Species:Xenopus tropicalis


Alignment Length:250 Identity:66/250 - (26%)
Similarity:121/250 - (48%) Gaps:26/250 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LQLNSGMKCAKYMLIIVSFMFALTAILLIMVGTTIQTIFGDFSLFIDGHFSSPPALLIAIGFILI 70
            :.:..||||.|:::...:|:|.:..|.||.:|..:|.......:..:...|..|.::|.:|.::.
 Frog     1 MAVEGGMKCVKFLMFFFNFVFWVCGIALIAIGIYVQIQLNHTLIMKNATSSGAPIVIIVVGVVIF 65

  Fly    71 AVAALGAYGAVKESVMVINLYGVCLFLVFILEVSAAIAAFVMQSQVRGMLIRTMNQALAEYEHDP 135
            .:|..|..||:||:..::..:.|.|.|:|::|::|||||:|.:.::|.....:....:..|....
 Frog    66 LIAFFGCCGALKENYCMVTTFAVVLVLIFLVEIAAAIAAYVYKDKLRTAFEDSFKNGMVHYNDTK 130

  Fly   136 YVESGVDFMQSMLECCGVNEPEDWKDYLSANVNFTLGVDDVVVPNSC-------CGNQP-TSLND 192
            .:...:|.:|...:|||.....||:.|    ..|| |.:  .||:||       ||..| .::|.
 Frog   131 DIADSIDLLQKEFQCCGAINSTDWRQY----APFT-GTN--TVPDSCCKNITAGCGKGPIANINS 188

  Fly   193 STQMTCMETYDYGCFRKMNFIVSQSAMLIATGATTVAFVQLLGVLCAFMLAKTLR 247
            .           ||...::..|.::..::|..|..:|..::||::.|..|.|.:|
 Frog   189 E-----------GCATGIDQWVKKNVGIVAGVALGIALFEILGIVFACCLMKGIR 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp29FbNP_523516.1 Tetraspanin 16..244 CDD:459767 60/235 (26%)
tetraspanin_LEL 109..210 CDD:351888 25/108 (23%)
cd63NP_001016413.1 Tetraspanin 22..227 CDD:459767 56/222 (25%)
tetraspanin_LEL 105..203 CDD:351888 25/115 (22%)

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