DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp29Fb and tspan5b

DIOPT Version :10

Sequence 1:NP_523516.1 Gene:Tsp29Fb / 34212 FlyBaseID:FBgn0032075 Length:308 Species:Drosophila melanogaster
Sequence 2:NP_001008591.1 Gene:tspan5b / 494048 ZFINID:ZDB-GENE-041212-12 Length:271 Species:Danio rerio


Alignment Length:279 Identity:66/279 - (23%)
Similarity:121/279 - (43%) Gaps:36/279 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSNRELQLNSGMKCAKYMLIIVSFMFALTAILLIMVGT---TIQTIFGDFSLFID-GHFSSPPAL 61
            ||.:...::....|.||.:...:.:|.|..:..:.|..   :.:.:..:.|...| |.| .|..|
Zfish     1 MSGKHFNVHEVGCCIKYFIFGFNIIFWLLGVAFLSVALWAWSEKGVLSNISSITDLGGF-DPVWL 64

  Fly    62 LIAIGFILIAVAALGAYGAVKESVMVINLYGVCLFLVFILEVSAAIAAFVMQSQVRGMLIRTMNQ 126
            .:.:|.::..:...|..||::|:..::..:.|.|.::|.||::|.:.|||.:..::..|...:|.
Zfish    65 FLVVGGVMFVLGFAGCIGALRENSFLLKFFSVFLGIIFFLELTAGVLAFVFKDWIKDQLKFFINN 129

  Fly   127 ALAEYEHDPYVESGVDFMQSMLECCGVNEPEDWKDYLSANVNF-----TLGVDDVVVPNSCCGNQ 186
            .:..|..|..:::.:||.|...||||...||||    :.|:.|     .|..:...||.|||...
Zfish   130 NIRAYRDDIDLQNLIDFTQDYWECCGAFGPEDW----NLNIYFNCTDTNLSREKCGVPFSCCTKD 190

  Fly   187 PTSLNDSTQMTCMETYDY---------------GCFRKMNFIVSQSAMLIATGATTVAFVQLLGV 236
            |.  .|.....|  .||.               ||..:....:.::..::|.....:|.:|:.|:
Zfish   191 PA--EDVINTQC--GYDIRGKGDIEHKTFIHTKGCVPQFEKWLQENLTVVAGIFIGIALLQIFGI 251

  Fly   237 LCAFMLAKTLRRNKSIREA 255
            ..|..|...:   :::||:
Zfish   252 CLAQNLLSDI---EAVRES 267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp29FbNP_523516.1 Tetraspanin 16..244 CDD:459767 61/251 (24%)
tetraspanin_LEL 109..210 CDD:351888 33/120 (28%)
tspan5bNP_001008591.1 Tetraspanin 15..258 CDD:459767 60/251 (24%)
TM4SF9_like_LEL 113..233 CDD:239412 32/127 (25%)

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