DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp29Fb and cd81b

DIOPT Version :10

Sequence 1:NP_523516.1 Gene:Tsp29Fb / 34212 FlyBaseID:FBgn0032075 Length:308 Species:Drosophila melanogaster
Sequence 2:NP_001003735.1 Gene:cd81b / 445280 ZFINID:ZDB-GENE-040808-52 Length:238 Species:Danio rerio


Alignment Length:251 Identity:58/251 - (23%)
Similarity:104/251 - (41%) Gaps:41/251 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 KCAKYMLIIVSFMFALTAILLIMVGTTIQTIFGDFSLFI--------DGHFSSPPALLIAIGFIL 69
            :|.||||..::|:|.|...:::.|...::......:|.:        .|.|.....:|||||.|:
Zfish     8 QCIKYMLFFLNFIFWLAGGVILGVALWLRHDSQTSNLLMLQFEGNQAPGTFYISVYVLIAIGAIM 72

  Fly    70 IAVAALGAYGAVKESVMVINLYGVCLFLVFILEVSAAIAAFVMQSQVRGMLIRTMNQALAEYEHD 134
            :.|..||.|||::||..::..:..||.::|..||:|.|..|:.:..:...||...:.|..: ..|
Zfish    73 MFVGFLGCYGAIQESQCLLGTFFTCLVILFACEVAAGIWGFINRDTISTELINFYDAAYIK-AVD 136

  Fly   135 PY-------VESGVDFMQSMLECCGVNEPED-WKDYLSANVNFTLGVDDVVVPNSCCGNQPTSLN 191
            |.       ....::.....|:|||..:..| :|                ||..|.|..:...|:
Zfish   137 PVDTTSRQTASKVLEVFHDNLDCCGKGDDNDLFK----------------VVQTSLCPKKTFPLD 185

  Fly   192 DSTQMTCMETYDYGCFRKMNFIVSQSAMLIATGATTVAFVQLLGVLCAFMLAKTLR 247
            .....:        |..|:..:.|:...:|...|..:|.:.:..::...:|...:|
Zfish   186 PLISQS--------CHVKLRNLFSEKLHVIGLAALVIAVIMVFEMIFTMVLCCAIR 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp29FbNP_523516.1 Tetraspanin 16..244 CDD:459767 56/243 (23%)
tetraspanin_LEL 109..210 CDD:351888 18/108 (17%)
cd81bNP_001003735.1 Tetraspanin 10..230 CDD:459767 56/244 (23%)

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