DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp29Fb and tspan36

DIOPT Version :10

Sequence 1:NP_523516.1 Gene:Tsp29Fb / 34212 FlyBaseID:FBgn0032075 Length:308 Species:Drosophila melanogaster
Sequence 2:NP_001002748.1 Gene:tspan36 / 437021 ZFINID:ZDB-GENE-040718-248 Length:243 Species:Danio rerio


Alignment Length:245 Identity:65/245 - (26%)
Similarity:115/245 - (46%) Gaps:35/245 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LNSGMKCAKYMLIIVSFMFALTAILLIMVGTTIQTIFGDFSLFI-DGHFSSPPALLIAIGFILIA 71
            ::.|:..:|.:|:::|.:|......|..||:.:...:.:|..|: |.|...|.|::|.:..::..
Zfish     1 MDCGIITSKTILLLLSLIFWAAGAALAYVGSYVIKSYNNFEDFMSDRHTLIPAAIIIGVAVVMFI 65

  Fly    72 VAALGAYGAVKESVMVINLYGVCLFLVFILEVSAAIAAFVMQSQVRGMLIRTMNQALAEYEHDPY 136
            :..:|....::||.:.:.|:.:.:.|:|..||:|.:...:.:.::||.|.::||....:|:....
Zfish    66 IGFVGCCATLRESKVGLGLFLIIIMLIFAAEVTAFVFGIIYRGRIRGDLEKSMNDVFLKYDGLNS 130

  Fly   137 VESGVDFMQSMLECCGVNEPEDW--KDYLSANVNFTLGVDDVVVPNSCCG----------NQPTS 189
            ....||::||.||||||....||  ..:.:.:.|        .||.|||.          :||..
Zfish   131 ETHAVDYLQSQLECCGVKNQTDWTLTSWFAQHNN--------TVPQSCCKANMTQCTGQLSQPDL 187

  Fly   190 LNDSTQMTCMETYDYGCFRKMNFI---VSQSAMLIATGATTVAFVQLLGV 236
            ||  ||         ||..|:..:   |...|||:..|...:.|..:|.|
Zfish   188 LN--TQ---------GCEAKLEQVLQDVLSYAMLVILGFAIIKFFGMLSV 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp29FbNP_523516.1 Tetraspanin 16..244 CDD:459767 64/237 (27%)
tetraspanin_LEL 109..210 CDD:351888 32/112 (29%)
tspan36NP_001002748.1 Tetraspanin 8..231 CDD:459767 64/238 (27%)
TM4SF8_like_LEL 103..206 CDD:239416 34/121 (28%)

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