DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp29Fb and tspan33a

DIOPT Version :10

Sequence 1:NP_523516.1 Gene:Tsp29Fb / 34212 FlyBaseID:FBgn0032075 Length:308 Species:Drosophila melanogaster
Sequence 2:NP_001002617.2 Gene:tspan33a / 436890 ZFINID:ZDB-GENE-040718-361 Length:281 Species:Danio rerio


Alignment Length:258 Identity:62/258 - (24%)
Similarity:120/258 - (46%) Gaps:42/258 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 KYMLIIVSFMFALTAILLIMVGTTIQTIFGDFS---LFIDGHFSSPPALLIAIGFILIAVAALGA 77
            ||:|...:.:|.:.:::||.:|...:.:..:.:   |.:|     |..:|:.:|.::..:...|.
Zfish    22 KYLLFFFNMIFWIISLVLISIGVYSRIVKHETALACLTVD-----PALILMVVGILMFFITFCGC 81

  Fly    78 YGAVKESVMVINLYGVCLFLVFILEVSAAIAAFVMQSQVRGMLIRTMNQALAEYEHDPYVESGVD 142
            .|:::|::.::..:.:.|.::|:|::.|.:..||...:.||.:....:.|:..|..|..:::.:|
Zfish    82 VGSLRENICLLQTFCIFLTIMFLLQLLAGVLGFVFSDKARGKVTDMFDNAIKHYRDDLDLQNLID 146

  Fly   143 FMQSMLECCGVNEPEDWKDYLSANVNFTLGVDD-----VVVPNSCC--GNQPTSLNDSTQMTC-- 198
            :.|....|||.....||    |.|:.|....|:     ..||.|||  ..:.|.:|    ..|  
Zfish   147 YGQKQFNCCGGISFMDW----SKNMYFNCSDDNPSRERCSVPFSCCLHAKEETIIN----TMCGH 203

  Fly   199 -METYDY----------GCFR-KMNFIVSQSAML--IATGATTVAFVQLLGVLCAFMLAKTLR 247
             |:..:|          ||.. .:|:|.|...:|  ||.|.|   ..||:|:|.:.:|...::
Zfish   204 GMQALNYLAASAFINTNGCIDILVNWIHSNLFLLGGIALGLT---IPQLVGILLSQVLINQIQ 263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp29FbNP_523516.1 Tetraspanin 16..244 CDD:459767 62/253 (25%)
tetraspanin_LEL 109..210 CDD:351888 30/121 (25%)
tspan33aNP_001002617.2 Tetraspanin 21..260 CDD:459767 62/253 (25%)
penumbra_like_LEL 114..234 CDD:239411 33/127 (26%)

Return to query results.
Submit another query.