DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp29Fb and tspan34b

DIOPT Version :10

Sequence 1:NP_523516.1 Gene:Tsp29Fb / 34212 FlyBaseID:FBgn0032075 Length:308 Species:Drosophila melanogaster
Sequence 2:NP_956702.2 Gene:tspan34b / 393380 ZFINID:ZDB-GENE-040426-1362 Length:243 Species:Danio rerio


Alignment Length:245 Identity:56/245 - (22%)
Similarity:117/245 - (47%) Gaps:35/245 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 KYMLIIVSFMFALTAILLIMVGTTIQTIFGDFSLFIDGHFSSPPA------------LLIAIGFI 68
            |.|:.:.:.:..|...:::.||..::...|....|:.   |.|.|            ||||:|.:
Zfish     8 KTMMFLFNGIIFLAGGVILGVGIWVKVDNGSILNFMQ---SLPGASSQMGQVLNVGYLLIALGAV 69

  Fly    69 LIAVAALGAYGAVKESVMVINLYGVCLFLVFILEVSAAIA--AF--VMQSQVRGMLIRTMNQALA 129
            |:.:..||..||:|||..::.|:.:.:.::||.||:.||.  ||  :.::.::.:.:..:....:
Zfish    70 LVVLGFLGCCGAIKESRCMLMLFFIIILIIFIAEVAGAIVILAFRPLAETLIKQLGVDAVKSLQS 134

  Fly   130 EYEHDPYVESGVDFMQSMLECCGVNEPEDWKD--YLSANVNFTLGVDDVVVPNSCCGNQPTSLND 192
            ::..:|.|....:...:.::|||.|...|:.:  ::::..|:         |..||...|.:   
Zfish   135 DFGKNPDVTGLWNTTMTGMKCCGFNNYTDFTNSFFVNSTKNY---------PVQCCNTSPCN--- 187

  Fly   193 STQMTCMETYDYGCFRKMNFIVSQSAMLIATGATTVAFVQLLGVLCAFML 242
              |...|.:...|||..:..:|.::|::|...|..:|.::|..::.:.:|
Zfish   188 --QAAVMNSTVTGCFPALIKLVDKNAVIIIAVALGIAALELAAMIVSMVL 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp29FbNP_523516.1 Tetraspanin 16..244 CDD:459767 56/245 (23%)
tetraspanin_LEL 109..210 CDD:351888 19/104 (18%)
tspan34bNP_956702.2 Tetraspanin 7..237 CDD:459767 56/245 (23%)
tetraspanin_LEL <139..211 CDD:351888 18/85 (21%)

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