DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp29Fb and tspan2a

DIOPT Version :10

Sequence 1:NP_523516.1 Gene:Tsp29Fb / 34212 FlyBaseID:FBgn0032075 Length:308 Species:Drosophila melanogaster
Sequence 2:NP_001018160.1 Gene:tspan2a / 378854 ZFINID:ZDB-GENE-050522-511 Length:211 Species:Danio rerio


Alignment Length:251 Identity:55/251 - (21%)
Similarity:105/251 - (41%) Gaps:58/251 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 MKCAKYMLIIVSFMFALTAILLIMVGTTIQTIFGDFSLFIDG----HFSSPPALLIAIGFILIAV 72
            |||.||:|.:.:|:|.|:..|::.||..::......||..:.    :|.....:||..|.|::.|
Zfish     8 MKCVKYLLFVFNFIFWLSGSLVLAVGLWLRFDPDTTSLLSENDAPENFFIAVYILIGAGGIMMIV 72

  Fly    73 AALGAYGAVKESVMVINLYGVCLFLVFILEVSAAIAAFVMQSQVRGMLIRTMNQALAEYEHDPYV 137
            ...|.:|||:||..::..:..||.|:|..||:|.:..|:.:.|:       :.:....||....:
Zfish    73 GFFGCFGAVRESQCLLGSFFACLLLIFGAEVAAGVFGFLNKDQI-------IKEVQNYYESATKM 130

  Fly   138 ESG---VDFMQSMLECCGVNEPEDWKDYLSANVNFTLGVDDVVVPNSCCGNQPTSLNDSTQMTCM 199
            |:|   .....|:|:|||                                         |:.:.:
Zfish   131 ENGTVITSAFHSVLDCCG-----------------------------------------TESSPI 154

  Fly   200 ETYDYG---CFRKMNFIVSQSAMLIATGATTVAFVQLLGVLCAFMLAKTLRRNKSI 252
            ||...|   |.:.:....::...:|......:|.|.::|::.:.:|...:|.::.:
Zfish   155 ETCTEGNKDCVQAIEDFFNEKLFIIGYVGIGIAGVMVIGMIFSMVLCCAIRNSREV 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp29FbNP_523516.1 Tetraspanin 16..244 CDD:459767 51/237 (22%)
tetraspanin_LEL 109..210 CDD:351888 16/106 (15%)
tspan2aNP_001018160.1 Tetraspanin 11..202 CDD:459767 51/238 (21%)

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