DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp29Fb and Tsp42El

DIOPT Version :10

Sequence 1:NP_523516.1 Gene:Tsp29Fb / 34212 FlyBaseID:FBgn0032075 Length:308 Species:Drosophila melanogaster
Sequence 2:NP_523638.1 Gene:Tsp42El / 35622 FlyBaseID:FBgn0033134 Length:217 Species:Drosophila melanogaster


Alignment Length:258 Identity:64/258 - (24%)
Similarity:111/258 - (43%) Gaps:63/258 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 MKCA----KYMLIIVSFMFALTAILLIMVGTTIQTIFGDFSLFIDGHFSSPPALLIAI---GFIL 69
            |.||    ||.|.:.:.::|:..||::        |||..     |..:.|.|..|.|   |..:
  Fly     1 MGCATGTIKYSLFLFNALWAILGILVL--------IFGGL-----GWGAMPDAYAIGILILGGTI 52

  Fly    70 IAVAALGAYGAVKESVMVINLYGVCLFLVFILEVSAAIAAFVM---QSQVRGMLIRTMNQALAEY 131
            :.::..|..|||:||..::..|...|.::.:|     |.||::   :...:...::|:..   ::
  Fly    53 LVISLFGCCGAVRESPRMLWTYASLLLILLLL-----IVAFIILNPKDVFKKYALQTVEN---QW 109

  Fly   132 EHDPYVESGVDFMQSMLECCGVNEPEDWKDYLSANVNFTLGVDDVVVPNSCCGNQPTSLNDSTQM 196
            |.:......:|.:|....|||.:..:|:.|     :.|.    :..||:|||       .|.:.:
  Fly   110 ELEQTKPGSMDIIQKTYYCCGRDSAQDYLD-----IKFW----NNTVPSSCC-------KDDSCV 158

  Fly   197 TCMETYDYGCFRKMNFIVSQSAMLIATGATTVAFVQ--LLG-----VLCAFMLA--KTLRRNK 250
            ..:..|..||..|:.       ...|..|||:.:::  |||     :|.|.:||  .|.||.:
  Fly   159 NPLNLYVRGCLIKVE-------EAFADEATTLGYLEWGLLGFNAVILLLAIILAIHYTNRRRR 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp29FbNP_523516.1 Tetraspanin 16..244 CDD:459767 58/242 (24%)
tetraspanin_LEL 109..210 CDD:351888 21/103 (20%)
Tsp42ElNP_523638.1 Tetraspanin 8..>130 CDD:459767 32/142 (23%)
tetraspanin_LEL 94..178 CDD:239401 20/109 (18%)

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