DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp29Fb and tspan17

DIOPT Version :10

Sequence 1:NP_523516.1 Gene:Tsp29Fb / 34212 FlyBaseID:FBgn0032075 Length:308 Species:Drosophila melanogaster
Sequence 2:XP_073777297.1 Gene:tspan17 / 324950 ZFINID:ZDB-GENE-030131-3673 Length:311 Species:Danio rerio


Alignment Length:290 Identity:73/290 - (25%)
Similarity:119/290 - (41%) Gaps:46/290 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 CAKYMLIIVSFMFALTAILLIMVGT---TIQTIFGDFSLFID-GHFSSPPALLIAIGFILIAVAA 74
            |.||.|...:.:|.|.....:.:|.   ..:.:..:.|...| |.| .|..|.|.:|.::..:..
Zfish    23 CVKYFLFGFNIIFWLLGAAFLGIGLWAWAEKGVLSNISSITDLGGF-DPVWLFIVVGGVMFILGF 86

  Fly    75 LGAYGAVKESVMVINLYGVCLFLVFILEVSAAIAAFVMQSQVRGMLIRTMNQALAEYEHDPYVES 139
            .|..||::|:..::..:.|.|.|:|.||::|.|.|||.:..::..|...:|..:..|..|..:::
Zfish    87 AGCIGALRENTFLLKFFSVFLGLIFFLELTAGILAFVFKDWIKDQLNFFINNNVKAYRDDIDLQN 151

  Fly   140 GVDFMQSMLECCGVNEPEDWKDYLSANVNFTLGVDD-------VVVPNSCCGNQPTSLNDSTQMT 197
            .:||.|....|||.:.|.||      |:|......|       ..||.|||...|.  .|.....
Zfish   152 LIDFAQEYWSCCGAHGPNDW------NLNIYFNCTDFNPSRERCGVPFSCCVKDPA--EDVLNTQ 208

  Fly   198 C-----------METYDY--GCFRKMNFIVSQSAMLIATGATTVAFVQLLGVLCAFMLAKTLRRN 249
            |           .:.|.|  ||..:....:..:.:::|.....:|.:|:.|: |   ||:.|   
Zfish   209 CGYDVRLQVELDQQKYIYTKGCVGQFEKWLQDNLIVVAGVFVGIALLQIFGI-C---LAQNL--- 266

  Fly   250 KSIREARRWQLQQSLGVLISGGKMAPPQNS 279
            |.:.....|:..      ..||:....|||
Zfish   267 KCLDSTSSWRND------FIGGRYLGSQNS 290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp29FbNP_523516.1 Tetraspanin 16..244 CDD:459767 63/251 (25%)
tetraspanin_LEL 109..210 CDD:351888 31/120 (26%)
tspan17XP_073777297.1 None

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