Protein Alignment Tsp29Fb and Tspan6

DIOPT Version :10

• Sequence 1: NP_523516.1
• Gene: Tsp29Fb / 34212
• FlyBaseID: FBgn0032075
• Length: 308
• Species: Drosophila melanogaster
• Sequence 2: NP_001094142.1
• Gene: Tspan6 / 302313
• RGDID: 1560160
• Length: 245
• Species: Rattus norvegicus
• Alignment Length: 261
• Identity: 76/261 - (29%)
• Similarity: 124/261 - (47%)
• Gaps: 37/261 - (14%)

  Fly     3 NRELQLNSGMKCAKYMLIIVSFMFALTAILLIMVGTTIQTIFGDFSLFIDGHFS-------SPPA 60
            :|.||....:.|.|.:|:|.:|:|.:|.::|:.||     |:|..||  :.:||       :.|.
  Rat     5 SRRLQTKPVITCFKSVLLIYTFIFWITGVILLAVG-----IWGKVSL--ENYFSLLNEKATNVPF 62

  Fly    61 LLIAIGFILIAVAALGAYGAVKESVMVINLYGVCLFLVFILEVSAAIAAFVMQSQVRGMLIRTMN 125
            :||..|.::|.:...|.:...:.|..::.||.:.|.|:|::|:.|||..||.:.:::........
  Rat    63 VLIGTGTVIILLGTFGCFATCRASAWMLKLYAMFLTLIFLVELVAAIVGFVFRHEIKNSFKSNYE 127

  Fly   126 QALAEYEHD-PYVESGVDFMQSMLECCGVNEPEDWK--DYLSANVNFTLGVDDVVVPNSCC---G 184
            .||.||... .|....||.:||.|.||||....|||  :|.|          :...|.|||   |
  Rat   128 NALKEYNSTRDYRSEAVDKIQSTLHCCGVTNYRDWKGTNYYS----------ETGFPKSCCKLEG 182

  Fly   185 NQPTSLNDSTQMTCMETYDYGCFRKMNFIVSQSAMLIATGATTVAFVQLLGVLCAFMLAKTLRRN 249
            ..|       |....:..:.|||.|:...:.....::|..:..||..||:|:..|:.|::.:..|
  Rat   183 CYP-------QRDADKVNEEGCFIKVMTTIESEMGVVAGISFGVACFQLIGIFLAYCLSRAITNN 240

  Fly   250 K 250
            :
  Rat   241 Q 241

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Tsp29Fb	NP_523516.1	Tetraspanin	16..244	CDD:459767	71/240 (30%)
		tetraspanin_LEL	109..210	CDD:351888	31/106 (29%)
Tspan6	NP_001094142.1	Tetraspanin	17..235	CDD:459767	71/241 (29%)
		TM4SF2_6_like_LEL	112..209	CDD:239414	32/113 (28%)