Protein Alignment Tsp29Fb and Tspan4

DIOPT Version :10

• Sequence 1: NP_523516.1
• Gene: Tsp29Fb / 34212
• FlyBaseID: FBgn0032075
• Length: 308
• Species: Drosophila melanogaster
• Sequence 2: NP_001426627.1
• Gene: Tspan4 / 293627
• RGDID: 1305810
• Length: 333
• Species: Rattus norvegicus
• Alignment Length: 237
• Identity: 56/237 - (23%)
• Similarity: 106/237 - (44%)
• Gaps: 30/237 - (12%)

  Fly    16 KYMLIIVSFMFALTAILLIMVGTTIQTIFGDFSLFIDGHFSSPPA--LLIAIGFILIAVAALGAY 78
            ||::...:.:|.|....::.||..:....|:|:. :...|.|..|  |||..|..::|:..:|..
  Rat   105 KYLMFAFNLLFWLGGCGVLGVGIWLAATQGNFAT-LSSSFPSLSAANLLIVTGTFVMAIGFVGCI 168

  Fly    79 GAVKESVMVINLYGVCLFLVFILEVSAAIAAFVMQSQVRGMLIRTMNQALAEY--EHDPYVESGV 141
            ||:||:..::..:.|.|.|||:||.:.|:..|....::.....:.:.:.|..|  |.:..:.:..
  Rat   169 GALKENKCLLLTFFVLLLLVFLLEATIAVLFFAYSDKIDSYAQQDLKKGLHLYGTEGNVGLTNAW 233

  Fly   142 DFMQSMLECCGVNEPEDWKDYLSANVNFTLGVDDVVVPNSCCGNQPTSLNDSTQMTCMETYDYG- 205
            ..:|:...||||:...||.:..:|          ..||:|||    ...:||..:     ::.|
  Rat   234 SIIQTDFRCCGVSNYTDWFEVYNA----------TRVPDSCC----LEFSDSCGL-----HEPGT 279

  Fly   206 -----CFRKMNFIVSQSAMLIATGATTVAFVQLLGVLCAFML 242
                 |:..:...:.::.:.:.......|.||:||:..|..:
  Rat   280 WWKSPCYETVKAWLQENLLAVGIFGLCTALVQILGLTFAMTM 321

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Tsp29Fb	NP_523516.1	Tetraspanin	16..244	CDD:459767	56/237 (24%)
		tetraspanin_LEL	109..210	CDD:351888	21/108 (19%)
Tspan4	NP_001426627.1	None