DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp29Fb and TSPAN16

DIOPT Version :10

Sequence 1:NP_523516.1 Gene:Tsp29Fb / 34212 FlyBaseID:FBgn0032075 Length:308 Species:Drosophila melanogaster
Sequence 2:NP_036598.1 Gene:TSPAN16 / 26526 HGNCID:30725 Length:245 Species:Homo sapiens


Alignment Length:241 Identity:53/241 - (21%)
Similarity:107/241 - (44%) Gaps:23/241 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 QLNSGMKCAKYMLIIVSFMFALTAILLIMV-------GTTIQTIFGDFSLFIDGHFSSPPALLIA 64
            ::::.....|.:|.:::...|::.|:|:.:       |.::..:.|..|.:: .|..:   |.:.
Human     3 EIHTPYSSLKKLLSLLNGFVAVSGIILVGLGIGGKCGGASLTNVLGLSSAYL-LHVGN---LCLV 63

  Fly    65 IGFILIAVAALGAYGAVKESVMVINLYGVCLFLVFILEVSAAIAAFVMQSQVRGMLIR----TMN 125
            :|.|.:.:...|.|||.|||...:....:.:.:|.|:||:||....:....|..:.:.    |:.
Human    64 MGCITVLLGCAGWYGATKESRGTLLFCILSMVIVLIMEVTAATVVLLFFPIVGDVALEHTFVTLR 128

  Fly   126 QALAEY-EHDPYVESGVDFMQSMLECCGVNEPEDWKDYLSANVNFTLGVDDVVVPNSCCGNQPTS 189
            :....| |.|.| .:..:.:...|:|||||   ::.|:..::...|.|   ...|.|||.:..:.
Human   129 KNYRGYNEPDDY-STQWNLVMEKLKCCGVN---NYTDFSGSSFEMTTG---HTYPRSCCKSIGSV 186

  Fly   190 LNDSTQMTCMETYDYGCFRKMNFIVSQSAMLIATGATTVAFVQLLG 235
            ..|...::....:..|||.|:..|....:..::..:...|.:|..|
Human   187 SCDGRDVSPNVIHQKGCFHKLLKITKTQSFTLSGSSLGAAVIQRWG 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp29FbNP_523516.1 Tetraspanin 16..244 CDD:459767 53/232 (23%)
tetraspanin_LEL 109..210 CDD:351888 23/105 (22%)
TSPAN16NP_036598.1 Tetraspanin 19..>155 CDD:459767 31/140 (22%)
uroplakin_I_like_LEL 120..215 CDD:239409 24/101 (24%)

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