DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp29Fb and Tspan8

DIOPT Version :10

Sequence 1:NP_523516.1 Gene:Tsp29Fb / 34212 FlyBaseID:FBgn0032075 Length:308 Species:Drosophila melanogaster
Sequence 2:NP_666122.1 Gene:Tspan8 / 216350 MGIID:2384918 Length:235 Species:Mus musculus


Alignment Length:246 Identity:59/246 - (23%)
Similarity:108/246 - (43%) Gaps:41/246 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 CAKYMLIIVSFMFALTAILLIMVGTTIQTIFGDFSLFIDGHFSSPP----ALLIAIGFILIAVAA 74
            |.||.:...:|:|.:...|::.:...::.......:...|..|:.|    .:|||:|.|::.:..
Mouse     7 CLKYSMFFFNFLFWVCGTLILGLAIWVRVSKDGKEIITSGDSSTNPFIAVNILIAVGSIIMVLGF 71

  Fly    75 LGAYGAVKESVMVINLYGVCLFLVFILEVSAAI--AAFVMQSQVRGMLIRTMNQALAEYEHDPYV 137
            ||..||||||..::.|:.:.|.|:.||:|:|.|  |||..:..      |.:|:.|  ||:...:
Mouse    72 LGCCGAVKESRCMLLLFFIGLLLILILQVAAGILGAAFKPEYN------RILNETL--YENAKLL 128

  Fly   138 ESGVD----------FMQSMLECCGV-NEPEDWKDYLSANVNFTLGVDDVVVPNSCCGNQPTSLN 191
            ....|          ..||..:|||: |...||.:      ||....:..    .|.|....:..
Mouse   129 SDNTDEAKDFQKAMIVFQSEFKCCGLENGAADWGN------NFVEAKESC----QCTGTDCATYQ 183

  Fly   192 DSTQMTCMETYDYGCFRKMNFIVSQSAMLIATGATTVAFVQLLGVLCAFML 242
            .|:      .|...|...:..:..::.:::...|..:|.:::||::.:.:|
Mouse   184 GSS------VYPKTCLSLIKDLFEKNIIIVIGIAFGLAVIEILGLVFSMVL 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp29FbNP_523516.1 Tetraspanin 16..244 CDD:459767 58/244 (24%)
tetraspanin_LEL 109..210 CDD:351888 23/111 (21%)
Tspan8NP_666122.1 Tetraspanin 8..230 CDD:459767 58/245 (24%)
TM4SF3_like_LEL 106..204 CDD:239407 24/121 (20%)

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