DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp29Fb and Tspan10

DIOPT Version :10

Sequence 1:NP_523516.1 Gene:Tsp29Fb / 34212 FlyBaseID:FBgn0032075 Length:308 Species:Drosophila melanogaster
Sequence 2:NP_663338.2 Gene:Tspan10 / 208634 MGIID:2384781 Length:332 Species:Mus musculus


Alignment Length:268 Identity:71/268 - (26%)
Similarity:121/268 - (45%) Gaps:28/268 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LQLNSGMKCAKYMLIIVSFMFALTAILLIMVGTTIQTIFGDFSLFIDGHFSSPPALLIAIGFILI 70
            |.|::|..|.||::.:.:|:|:|.::|.:..|....|:.....:...|...:.|.|::.:|.:::
Mouse    66 LPLSTGSNCVKYLIFLSNFLFSLPSLLALAAGLWGLTVKRSQGIGWGGPVPTDPMLMLVLGGLVV 130

  Fly    71 AVAAL-GAYGAVKESVMVINLY-GVCLFLVFILEVSAAIAAFVMQSQVRGMLIRTMNQALAEYEH 133
            :|.:| |..||..|:..:::.| |..||.: .||..|.:....:...::..|..|::.|:..|..
Mouse   131 SVVSLSGCLGAFCENSCLLHWYCGAVLFCL-ALEALAGVLMVTLWKPLQDSLKYTLHAAIIHYWD 194

  Fly   134 DPYVESGVDFMQSMLECCGVNEPEDWKDYLSANVNFTLGVDDVVVPNSCCGN-QPTSLNDSTQMT 197
            ||.:...:|.:|..|:|||....:||:..|..|.: :.||....:|.|||.| |......:||  
Mouse   195 DPDLHFLLDQVQLGLQCCGAVSYQDWQQNLYFNCS-SPGVQACSLPASCCINPQEDGAVVNTQ-- 256

  Fly   198 CMETYDYGCFRKMNFIVSQSAMLI---------------ATGATTVAFVQLLGVLCAFMLAKTLR 247
            |    .:|.......:..|...|.               |.|...||.|.:.|.  ..:||..|.
Mouse   257 C----GFGALGLDQNVAGQVVFLQGCWPALQEWLRGNTGAIGDCAVAVVMIQGT--ELLLAACLL 315

  Fly   248 RNKSIREA 255
            |..::.||
Mouse   316 RALAVHEA 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp29FbNP_523516.1 Tetraspanin 16..244 CDD:459767 62/245 (25%)
tetraspanin_LEL 109..210 CDD:351888 28/101 (28%)
Tspan10NP_663338.2 Tetraspanin 75..225 CDD:459767 39/150 (26%)
oculospanin_like_LEL 171..290 CDD:239420 30/125 (24%)

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