DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp29Fb and tsp-11

DIOPT Version :10

Sequence 1:NP_523516.1 Gene:Tsp29Fb / 34212 FlyBaseID:FBgn0032075 Length:308 Species:Drosophila melanogaster
Sequence 2:NP_509546.4 Gene:tsp-11 / 192064 WormBaseID:WBGene00006637 Length:287 Species:Caenorhabditis elegans


Alignment Length:295 Identity:65/295 - (22%)
Similarity:116/295 - (39%) Gaps:76/295 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LQLNSGMKCAKYMLIIVSFMFALTAILLIMVGTTIQTIFGDFSL--------FIDGH-------- 54
            :.|:...:..|:.|.|.:.:|.|..  ||.:|..:..:...:::        .:.|:        
 Worm     9 MPLSCTARALKFSLFIFNLVFLLCG--LICLGIGLWLVLDKYAIDNLAFATAKVQGYDQDAGLRD 71

  Fly    55 -FSSPPA------LLIAIGFILIAVAALGAYGAVKESVMVINLYGVCLFLVFILEVSAAIAAF-- 110
             .:.|.|      ||...|||:|.||.||..||.||...::..|..||.|:..::::|.|.||  
 Worm    72 LATKPTAVRQFGYLLFVGGFIVIVVAFLGCCGAAKEWRPLLCCYSSCLMLILAIQIAATIYAFLH 136

  Fly   111 ----------VMQSQVRGMLIRTMNQALAEYEHDP-YVESGVDFMQSMLECCGVNEP------ED 158
                      ::.|.:: |...|.|..::....|. .|::..|.:.....||||:..      ..
 Worm   137 SHMFENDFRDILHSSLK-MYNGTDNMKVSNNPQDGLLVKTAWDKIMIEKSCCGVDSKIGEFNNSG 200

  Fly   159 WKDYLSANVNFTLGVDDVVVPNSCCGNQPTSLNDSTQMTC--METYDYGCFRKM---------NF 212
            |.........|         |.:||   |...:...:..|  :..:.:||:.|:         :|
 Worm   201 WYQLNHGRYQF---------PPACC---PPDEHGRLRPYCNTIMRHSHGCYAKIAESFEEVTSHF 253

  Fly   213 -IVSQSAMLIATGATTVAFVQLLGVLCAFMLAKTL 246
             |||.:.:|.       |.:|::|::..|.|..::
 Worm   254 KIVSWTVVLF-------ALIQVVGIVVGFWLCDSI 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp29FbNP_523516.1 Tetraspanin 16..244 CDD:459767 64/281 (23%)
tetraspanin_LEL 109..210 CDD:351888 22/121 (18%)
tsp-11NP_509546.4 Tetraspanin 18..278 CDD:459767 63/281 (22%)

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