DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp29Fb and tsp-8

DIOPT Version :10

Sequence 1:NP_523516.1 Gene:Tsp29Fb / 34212 FlyBaseID:FBgn0032075 Length:308 Species:Drosophila melanogaster
Sequence 2:NP_510445.1 Gene:tsp-8 / 181567 WormBaseID:WBGene00006634 Length:282 Species:Caenorhabditis elegans


Alignment Length:272 Identity:69/272 - (25%)
Similarity:104/272 - (38%) Gaps:54/272 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 LIIVSFMFALTAIL--LIMVGTTIQTIF----GDFSLFIDGHFSSPPA------LLIAIGFILIA 71
            |.||:|:|.....|  :::.|..|..:|    .||...   |.:.|.|      .|:..|.|:|.
 Worm     8 LRIVTFLFNFAFWLSGVVVFGLGIWLLFDPAASDFFAL---HSTHPGAFRYVGWFLVGAGAIIIL 69

  Fly    72 VAALGAYGAVKESVMVINLYGVCLFLVFILEVSAAIAAFVMQSQVRGMLIRTMNQALA-EYEHDP 135
            |...|..||.|.:...:..:...|.|.|.||::||:..|..|..::..:..:|...:. .|..:.
 Worm    70 VGYFGCIGAWKMNQCALAFFCCILILAFFLELAAAVTLFHKQEHIKHYVESSMYDTIRNRYSSET 134

  Fly   136 YVESGVDFMQSMLECCGVNEPEDWKDYLSA------NVNFTLGVDDV------------------ 176
            ..:...|.:|...|||||....||   |||      :....:..:|.                  
 Worm   135 AFKDAFDTVQEKFECCGVKTYTDW---LSARWDAEPSTQLEVNEEDAGRIEHGIGAFGGNKGTGY 196

  Fly   177 -VVPNSCCG-----NQPTSLNDSTQMTCMETY-----DYGCFRKMNFIVSQSAMLIATGATTVAF 230
             .||:|||.     :.|.:...|.....:.||     ..||...:...||.|..||......:..
 Worm   197 GRVPSSCCNEHGKLSYPNNCGRSFSQAPLNTYAQFINTRGCADAVYESVSSSLSLIVGVCVVLCI 261

  Fly   231 VQLLGVLCAFML 242
            |||||::.:..|
 Worm   262 VQLLGIVLSMTL 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp29FbNP_523516.1 Tetraspanin 16..244 CDD:459767 69/272 (25%)
tetraspanin_LEL 109..210 CDD:351888 28/136 (21%)
tsp-8NP_510445.1 Tetraspanin 8..>151 CDD:459767 38/145 (26%)
tetraspanin_LEL 108..243 CDD:239401 28/137 (20%)

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