DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp29Fb and tsp-20

DIOPT Version :10

Sequence 1:NP_523516.1 Gene:Tsp29Fb / 34212 FlyBaseID:FBgn0032075 Length:308 Species:Drosophila melanogaster
Sequence 2:NP_510014.1 Gene:tsp-20 / 181376 WormBaseID:WBGene00006646 Length:279 Species:Caenorhabditis elegans


Alignment Length:275 Identity:63/275 - (22%)
Similarity:100/275 - (36%) Gaps:73/275 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 NRELQLNSGMKCAK------YMLIIVSFMFALTAILLIMVGTTIQTIF-GDFSLFIDGHFSSPPA 60
            ||.....||. |:|      |:|:||..:|...||.|.        || ||....|..||.....
 Worm    14 NRRSGSCSGC-CSKCQLFISYLLVIVGILFLALAIWLY--------IFRGDLIPLIQSHFYVKCI 69

  Fly    61 LL--------IAIGFILIAVAALGAYGAVKESVMVINLYGVCLFLVFILEVSAAIAAFVM----- 112
            .|        :.|||::        :.||.....:: .|  .|.|:|.:.:...:..|..     
 Worm    70 YLAVGCGVFNVIIGFLV--------HSAVSNRCALV-FY--LLMLIFSMIMEGCLIYFTFSYHAT 123

  Fly   113 -QSQVRGMLIRTMNQALAEYEHDPYVESGVDFMQSMLECCGVNEPEDW------KDYLSANVNFT 170
             :.::...|   .|..|..|..||.:...|:::|...:|||.|...||      ..||.......
 Worm   124 YEQELNASL---PNDILNNYNLDPNIAKAVNYLQRDSKCCGSNAFNDWPKPEVEDHYLPYAKTVV 185

  Fly   171 LGVDDVVVPNSCCGN----QPTSLNDSTQMTCMETYDYGC--------FRKMNFIVSQSAMLIAT 223
            ..|.  .:|:|||.:    :..:|:||..    ..:..||        :..:||:.:     :..
 Worm   186 QRVQ--YIPDSCCKSTHQRKGCALSDSPN----NIFYRGCLPFLKEEVYNNLNFLFT-----VTA 239

  Fly   224 GATTVAFVQLLGVLC 238
            .:..:.|..|:...|
 Worm   240 ASLVLHFANLIFGCC 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp29FbNP_523516.1 Tetraspanin 16..244 CDD:459767 58/262 (22%)
tetraspanin_LEL 109..210 CDD:351888 27/124 (22%)
tsp-20NP_510014.1 Tetraspanin 25..257 CDD:459767 58/263 (22%)
CD151_like_LEL 118..231 CDD:239408 26/121 (21%)

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