DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp29Fb and LOC1274940

DIOPT Version :10

Sequence 1:NP_523516.1 Gene:Tsp29Fb / 34212 FlyBaseID:FBgn0032075 Length:308 Species:Drosophila melanogaster
Sequence 2:XP_314136.5 Gene:LOC1274940 / 1274940 VectorBaseID:AGAMI1_014205 Length:249 Species:Anopheles gambiae


Alignment Length:258 Identity:73/258 - (28%)
Similarity:136/258 - (52%) Gaps:25/258 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSNRELQLNS-GMKCAKYMLIIVSFMFALTAILLIMVGTTIQTIFGDFSLFIDGHFSSPPALLIA 64
            |.|...::|| |....||:|.:.:.:||::.::|::.|..:.....|:..|:.....:||.:||.
Mosquito     6 MDNLRERMNSCGTTTIKYLLFVFNLIFAISGLILLVAGIVVLVDVNDYQHFVQDRLMAPPVVLIV 70

  Fly    65 IGFILIAVAALGAYGAVKESVMVINLYGVCLFLVFILEVSAAIAAFVMQSQVRGMLIRTMNQALA 129
            :|.::..||:||.|||:|||..::|.:.|.|.:||::|::.||||...::.::..|.:.:::::|
Mosquito    71 VGSLVFLVASLGCYGAIKESPKLLNAFAVFLLIVFLIEIAVAIAAIAFKADLQDALRKQLDKSIA 135

  Fly   130 EYEHDPYVESGVDFMQSMLECCGVNEPEDWKDYLSANVNFTLGVDDVVVPNSCCGNQPTSLNDST 194
              .|:....:..:.:...:.|||:..|:||.|    |:|.|:       |.|||  :|..:...|
Mosquito   136 --RHNNADMAAWNSVHRNMMCCGIQGPKDWYD----NLNRTM-------PASCC--KPDLIEPET 185

  Fly   195 QMTCMET--------YDYGCFRKMNFIVSQSAMLIATGATTVAFVQLLGVLCAFMLAKTLRRN 249
            . .|...        |..||..|:.....::|:::......:|..|||||..|..|:.:::|:
Mosquito   186 N-DCKNAPPLFMDRYYQDGCLMKLEDHFHKNAVVLIAVGFAIAIFQLLGVFFACWLSSSIKRS 247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp29FbNP_523516.1 Tetraspanin 16..244 CDD:459767 67/235 (29%)
tetraspanin_LEL 109..210 CDD:351888 24/108 (22%)
LOC1274940XP_314136.5 None

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