DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp29Fb and Cd82

DIOPT Version :10

Sequence 1:NP_523516.1 Gene:Tsp29Fb / 34212 FlyBaseID:FBgn0032075 Length:308 Species:Drosophila melanogaster
Sequence 2:NP_031682.1 Gene:Cd82 / 12521 MGIID:104651 Length:266 Species:Mus musculus


Alignment Length:266 Identity:57/266 - (21%)
Similarity:103/266 - (38%) Gaps:51/266 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 MKCAKYMLIIVSFMFALTAILLIMVGTTIQTIFGDFSLFIDGHFSSPPAL------LIAIGFILI 70
            :|..||.|.:.:.:|.:...:::..|.   .|..|.:.||....:|..:|      .|.:|.|.|
Mouse     6 VKVTKYFLFLFNLLFFILGAVILGFGV---WILADKNSFISVLQTSSSSLQVGAYVFIGVGAITI 67

  Fly    71 AVAALGAYGAVKESVMVINLYGVCLFLVFILEVSAAIAAFVMQSQVRGMLIRTMNQALAEYEHDP 135
            .:..||..|||.|...::.||.|.|.|:.|.:|:..:..:....:::..:..|:...:..|..:.
Mouse    68 VMGFLGCIGAVNEVRCLLGLYFVFLLLILIAQVTVGVLFYFNADKLKKEMGNTVMDIIRNYTANA 132

  Fly   136 YV--ESGVDFMQSMLECCGVNEPEDWKDYLSANVNFTL-GVDDVVVPNSC--------------- 182
            ..  |...|::|:.::|||      |..:.:...|..| |......|.||               
Mouse   133 TSSREEAWDYVQAQVKCCG------WVSHYNWTENEELMGFTKTTYPCSCEKIKEEDNQLIVKKG 191

  Fly   183 -C--------GNQPTSLNDSTQMTCMETYDYGCFRKMNFIVSQSAMLIATGATTVAFVQLLGVLC 238
             |        .|.|.....:|:         ||..|....:.::..::......||.::|||:..
Mouse   192 FCEADNSTVSENNPEDWPVNTE---------GCMEKAQAWLQENFGILLGVCAGVAVIELLGLFL 247

  Fly   239 AFMLAK 244
            :..|.:
Mouse   248 SICLCR 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp29FbNP_523516.1 Tetraspanin 16..244 CDD:459767 56/260 (22%)
tetraspanin_LEL 109..210 CDD:351888 21/127 (17%)
Cd82NP_031682.1 Tetraspanin 24..253 CDD:459767 52/246 (21%)
CD37_CD82_like_LEL 106..228 CDD:239413 22/136 (16%)

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