DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp29Fb and XB5867320

DIOPT Version :10

Sequence 1:NP_523516.1 Gene:Tsp29Fb / 34212 FlyBaseID:FBgn0032075 Length:308 Species:Drosophila melanogaster
Sequence 2:XP_002932228.2 Gene:XB5867320 / 100497410 XenbaseID:XB-GENE-5867321 Length:250 Species:Xenopus tropicalis


Alignment Length:238 Identity:55/238 - (23%)
Similarity:107/238 - (44%) Gaps:7/238 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 MKCAKYMLIIVSFMFALTAILLIMVGTTIQTIFGDFSLFIDGHFSSPPALLIAIGFILIAVAALG 76
            |...|..|:..||:|.:..:.::.||...:....::.:.....:.:.|.:|:..|..::....||
 Frog     1 MAFLKLSLMAFSFVFWIAGLAMLTVGIWTKISLEEYLVLSTNDYPNTPVILLGSGAAVLLWGFLG 65

  Fly    77 AYGAVKESVMVINLYGVCLFLVFILEVSAAIAAFVMQSQVRGMLIRTMNQALAEYEHDPYVESGV 141
            .:.|..|...::..||:....|.:..::|.::|...:..:.......:..|:..|..|......:
 Frog    66 CFSAAAERRCLLRTYGLFQLAVLLAGLAAGLSALFYRRDIAEGFQSGLQNAVQSYAEDEEKADAL 130

  Fly   142 DFMQSMLECCGVNEPEDW------KDYLSANVNFTLGVDDVVVPNSCCGNQPTSLNDSTQMTCME 200
            |.:|..|.||||:..:||      .:.|..:.:|....:: .||:|||..:....|:........
 Frog   131 DDIQRALHCCGVHSYQDWFESPWSLEQLEQHQSFGEHSNN-SVPSSCCQVRRGCRNNPLLPGAPG 194

  Fly   201 TYDYGCFRKMNFIVSQSAMLIATGATTVAFVQLLGVLCAFMLA 243
            .:..|||:|:...||.:...|||.|..:|.:|::|::...:||
 Frog   195 IHWDGCFKKVCDFVSDNMFYIATSALGLALIQVVGIVLTCLLA 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp29FbNP_523516.1 Tetraspanin 16..244 CDD:459767 54/234 (23%)
tetraspanin_LEL 109..210 CDD:351888 24/106 (23%)
XB5867320XP_002932228.2 Tetraspanin 4..237 CDD:459767 52/233 (22%)
tetraspanin_LEL 100..212 CDD:351888 26/112 (23%)

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