DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp29Fb and prph2la

DIOPT Version :10

Sequence 1:NP_523516.1 Gene:Tsp29Fb / 34212 FlyBaseID:FBgn0032075 Length:308 Species:Drosophila melanogaster
Sequence 2:XP_005158919.1 Gene:prph2la / 100331800 ZFINID:ZDB-GENE-130530-548 Length:364 Species:Danio rerio


Alignment Length:306 Identity:70/306 - (22%)
Similarity:117/306 - (38%) Gaps:73/306 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 MLIIVSFMFALTAILLIMVGTTIQT-IFGDFSLFIDGHFSSPPALLIAIGFILIAVAALG---AY 78
            :|.:::::..:|.|:|..:|..::. |:....|..:|...|.|.:||.:|.|...:..||   .|
Zfish    19 VLWVLNWISVVTGIILFSLGIFLKVEIYKRQDLMAEGQLQSVPNMLIVVGLIACVINFLGGKICY 83

  Fly    79 GAVKES-----VMVINLYGVCLFLVFILEVSAAIAAFVMQSQVRGMLIRTMNQALAEYEHDP--- 135
            ..|..|     .:|:..|.:|:|...:..:..|:..:.|.||:...|...:..|:..|:...   
Zfish    84 DCVDSSRFLHWKLVMLPYIICMFFFTLSVLVGALMCYSMHSQLEESLTLGLRDAMRYYKDTDTPG 148

  Fly   136 --YVESGVDFMQSMLECCGVNEPEDW------------------KDYLSANVNFTLGVDDVVVPN 180
              :::..||.:|...:|||.....||                  .|.|.:||.....:|.  ||.
Zfish   149 RCFLKRTVDLLQMQFQCCGNEGFRDWFQIQWVSNRYLDMSQREVVDRLRSNVESKYLMDG--VPF 211

  Fly   181 SCCG-NQPTSL------NDSTQMTCMETYDY----------GCFRKM-----NFIVSQSAMLI-- 221
            |||. |.|...      |:|...    .|||          ||.:.:     |.:.|...|::  
Zfish   212 SCCNVNSPRPCIQHQISNNSAHF----NYDYQTEELNLWMRGCRQALLQYYTNIMHSIGLMVLII 272

  Fly   222 ----ATGATTVAFVQLLGVLCAFMLAKTLRRNKSIREARRWQLQQS 263
                .:..|.|.::|.       .|...||:.....|:..|.|:.|
Zfish   273 WLFELSVLTGVRYLQT-------SLENVLRQGDPECESDGWLLENS 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp29FbNP_523516.1 Tetraspanin 16..244 CDD:459767 64/285 (22%)
tetraspanin_LEL 109..210 CDD:351888 33/140 (24%)
prph2laXP_005158919.1 Tetraspanin 16..181 CDD:459767 38/161 (24%)
peripherin_like_LEL 120..262 CDD:239415 34/147 (23%)

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