DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp29Fb and tspan9

DIOPT Version :10

Sequence 1:NP_523516.1 Gene:Tsp29Fb / 34212 FlyBaseID:FBgn0032075 Length:308 Species:Drosophila melanogaster
Sequence 2:XP_012813987.1 Gene:tspan9 / 100144960 XenbaseID:XB-GENE-956624 Length:326 Species:Xenopus tropicalis


Alignment Length:245 Identity:61/245 - (24%)
Similarity:110/245 - (44%) Gaps:30/245 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 CAKYMLIIVSFMFALTAILLIMVGTTIQTIFGDFSLFIDGHFS-SPPALLIAIGFILIAVAALGA 77
            |.|||:.:.:.:|.|....|:.||..:....|:|:.|.....| |...|:||||.|::....||.
 Frog    95 CLKYMMFLFNLIFWLCGCGLLGVGIWLSVSQGNFATFSPSFPSLSAANLVIAIGTIVMVTGFLGC 159

  Fly    78 YGAVKESVMVINLYGVCLFLVFILEVSAAIAAFVMQSQVRGMLIRTMNQALAEY--EHDPYVESG 140
            .||:||:..::..:.:.|.::.:.|:...|..||...:|.....:.:...|..|  |::..:::.
 Frog   160 LGAIKENKCLLLSFFIILLIILLAELILLILFFVYMDKVNENAKQDLKDGLLLYNTENNVGLKNA 224

  Fly   141 VDFMQSMLECCGVNEPEDWKDYLSANVNFTLGVDDVVVPNSC-------CGNQPTSLNDSTQMTC 198
            .:.:|:.:.||||.:..||...|..|          .||:.|       ||:..|||        
 Frog   225 WNIIQAEMHCCGVTDYTDWYPVLGEN----------TVPDRCCMENSQDCGHNSTSL-------- 271

  Fly   199 METYDYGCFRKMNFIVSQSAMLIATGATTVAFVQLLGVLCAFMLAKTLRR 248
              .:..||:.|:......:..::.|....:..:|:||:..:..|.:.:.|
 Frog   272 --VWKTGCYEKVKMWFDDNKHVLGTIGMCILIIQILGMAFSMTLFQQIHR 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp29FbNP_523516.1 Tetraspanin 16..244 CDD:459767 59/237 (25%)
tetraspanin_LEL 109..210 CDD:351888 25/109 (23%)
tspan9XP_012813987.1 Tetraspanin 96..315 CDD:459767 59/238 (25%)
NET-5_like_LEL 192..289 CDD:239418 26/116 (22%)

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