DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp29Fb and cd37

DIOPT Version :10

Sequence 1:NP_523516.1 Gene:Tsp29Fb / 34212 FlyBaseID:FBgn0032075 Length:308 Species:Drosophila melanogaster
Sequence 2:XP_073773386.1 Gene:cd37 / 100124595 ZFINID:ZDB-GENE-070820-17 Length:281 Species:Danio rerio


Alignment Length:240 Identity:52/240 - (21%)
Similarity:99/240 - (41%) Gaps:35/240 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 KYMLIIVSFMFALTAILLIMVG--------TTIQTIFGDFSLFIDGHFSSPPALLIAIGFILIAV 72
            ||.|.:.:.:|.|...||:..|        :.|:|....|..:|.  .|....|||..|.:.:::
Zfish    11 KYFLFLFNLVFFLLGSLLLSSGLWMLLSDTSEIKTFIDPFRPYIS--ISLLSYLLIISGSVTMSL 73

  Fly    73 AALGAYGAVKESVMVINLYGVCLFLVFILEVSAAIAAFVMQSQVRGMLIRTMNQALAEYEHDPYV 137
            ...|..|::|....::.:|.:.|.::...::...:..:.|::::...|.:..:...:...:|...
Zfish    74 GFFGCLGSLKTVKFLLAIYFILLTVLLAAQIVGGVLFYTMKTELSKSLGKETDLIQSFGRNDSSF 138

  Fly   138 ESGVDFMQSMLECCGVNEPEDWKDYLSANVNFTLGVDDVVVPNSCC--GNQPTSLNDSTQ----- 195
            :..:|::|...||||.|..|||.|               .:|.||.  .|:...|.|:..     
Zfish   139 KKTMDYIQRQEECCGWNGKEDWGD---------------SIPCSCYHKANETKELCDNCSPDFFY 188

  Fly   196 --MTCMETYDYGCFRKMNFIVSQSAMLIATGATTVAFVQLLGVLC 238
              ::| :.||.||..|:...:..:...|......::.|:.|...|
Zfish   189 PVLSC-KIYDEGCKDKVENWLGSNLHFILWVILAISVVECLQWTC 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp29FbNP_523516.1 Tetraspanin 16..244 CDD:459767 52/240 (22%)
tetraspanin_LEL 109..210 CDD:351888 25/109 (23%)
cd37XP_073773386.1 None

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