DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp29Fa and TSPAN18

DIOPT Version :10

Sequence 1:NP_523515.1 Gene:Tsp29Fa / 34211 FlyBaseID:FBgn0032074 Length:248 Species:Drosophila melanogaster
Sequence 2:XP_005253274.1 Gene:TSPAN18 / 90139 HGNCID:20660 Length:258 Species:Homo sapiens


Alignment Length:43 Identity:10/43 - (23%)
Similarity:18/43 - (41%) Gaps:0/43 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 GILFVVHIPSARYERELRRKEQELLAKTATVTTEDEKDGERPS 45
            |:....:.|....:|..|..::.:|.:...|....||.|..|:
Human    93 GLEVTAYSPLGSSDRAWRDPDEPVLLEEPVVLALAEKYGRSPA 135

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp29FaNP_523515.1 Tetraspanin 11..236 CDD:459767 9/35 (26%)
tetraspanin_LEL 126..201 CDD:351888
TSPAN18XP_005253274.1 Tetraspanin 20..255 CDD:459767 10/43 (23%)
uroplakin_I_like_LEL 115..228 CDD:239409 6/21 (29%)
Blue background indicates that the domain is not in the aligned region.

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