DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp29Fa and tspan10

DIOPT Version :10

Sequence 1:NP_523515.1 Gene:Tsp29Fa / 34211 FlyBaseID:FBgn0032074 Length:248 Species:Drosophila melanogaster
Sequence 2:XP_001339579.3 Gene:tspan10 / 799194 ZFINID:ZDB-GENE-041111-201 Length:347 Species:Danio rerio


Alignment Length:261 Identity:63/261 - (24%)
Similarity:114/261 - (43%) Gaps:46/261 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 VKYTLFGFNLIFLITGIILIAVGAGVGAVYTGYKLFLAGKFFSIPT----FLIVIGSFIIIISFF 71
            :||.|...||:|...|:..:.:|.. |.:  ..:.|...|...|.|    ..:.:|..:.::|..
Zfish    89 LKYLLISSNLLFTALGLATLVLGLW-GLI--NKESFAQEKISGIGTDPMLLFLFLGLVLALLSMT 150

  Fly    72 GCWGALKENYCLVLSFSVMLAIIFILELAAGISGYVLRNDASDLIKTSLTYSLNEY-NSINPNAT 135
            ||.|||:||.||:..||..:.::.:.::.|.::.:.::....|.::..:..::..| :.::....
Zfish   151 GCIGALRENMCLLRIFSAAVFLLVVAQVLAAVALFSMQAQMEDYLRLGMLTAIVRYQDDLDLRFI 215

  Fly   136 TKLWDDIQDEFECCGVTSYNDW-ITAFPNGD--------LPISCCNVHVGAVGTFTCNNAQSSVA 191
            |   |:||...:|||..:|.|| |..:.|..        :|.|||   :..:...|..|:|..|.
Zfish   216 T---DEIQTSLQCCGADTYRDWEINVYYNCSAPGVQACGVPPSCC---IDPLENGTVWNSQCGVG 274

  Fly   192 DRHKVGCLDGFSGYISAHAVSLGA------------AGVVI-AILQFFGV-IFACYIAREI--KI 240
            .:.    ||.||   :...:.||.            .||:: .::...|: |...:|...:  ||
Zfish   275 AQQ----LDEFS---AQSVIFLGGCLGSVARWMEHNGGVIVTVVIVLLGIQILTLFITARLLHKI 332

  Fly   241 R 241
            |
Zfish   333 R 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp29FaNP_523515.1 Tetraspanin 11..236 CDD:459767 60/252 (24%)
tetraspanin_LEL 126..201 CDD:351888 22/84 (26%)
tspan10XP_001339579.3 None

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