DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp29Fa and tspan13a

DIOPT Version :10

Sequence 1:NP_523515.1 Gene:Tsp29Fa / 34211 FlyBaseID:FBgn0032074 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_001002334.1 Gene:tspan13a / 798836 ZFINID:ZDB-GENE-040718-19 Length:203 Species:Danio rerio


Alignment Length:168 Identity:36/168 - (21%)
Similarity:72/168 - (42%) Gaps:34/168 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 NLIFLITGIILIAVGA-GVGAVYTGYKLFLAGKFFSIPTFLIVIGSFIIIISFFGCWGALKENYC 82
            |||:::..::||.|.| |        |.|.....||:...:|.:|.|:.|::..|..||:|.:..
Zfish    17 NLIYVLVSLLLIGVAAWG--------KWFGLVSSFSVMGAVIAVGLFLFIVAIIGLCGAVKHHQV 73

  Fly    83 LVLSFSVMLAIIFILELAAGISGYVLRNDASDLIKTSLTYSLNEYNSINPNATTKLWDDIQDEFE 147
            |:..:..:|.::||::.:...:...:..:..:|:.           .|..|.:..:..|::....
Zfish    74 LLFFYMFILFLVFIVQFSVSCACLAINKEQQNLLL-----------EIGWNKSESMQSDLERSLN 127

  Fly   148 CCGVTSYNDWITAFPNGDLPISC--------CNVHVGA 177
            ||      |::....:|....:|        |:|.:.|
Zfish   128 CC------DFLQVDYSGSCEATCFKEKTCKPCSVIIQA 159

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp29FaNP_523515.1 Tetraspanin 11..236 CDD:459767 36/168 (21%)
tetraspanin_LEL 126..201 CDD:351888 11/60 (18%)
tspan13aNP_001002334.1 Tetraspanin 9..189 CDD:459767 36/168 (21%)

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