DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp29Fa and tspan6

DIOPT Version :9

Sequence 1:NP_001162915.1 Gene:Tsp29Fa / 34211 FlyBaseID:FBgn0032074 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_001039117.1 Gene:tspan6 / 733938 XenbaseID:XB-GENE-868432 Length:252 Species:Xenopus tropicalis


Alignment Length:237 Identity:70/237 - (29%)
Similarity:112/237 - (47%) Gaps:18/237 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 VKYTLFGFNLIFLITGIILIAVGAGVGAVYTGYKLFLAGKFFSIPTFLIVIGSFIIIISFFGCWG 75
            :|..|..:..||.|||:||:.||.........|...|.....::|..||..|:.||::..|||:.
 Frog    17 LKSVLLIYTFIFWITGVILLTVGVWGKVSLDIYFSLLNENATNVPYVLIGTGAVIILLGTFGCFA 81

  Fly    76 ALKENYCLVLSFSVMLAIIFILELAAGISGYVLRNDASDLIKTSLTYSLNEYNSINPNATTKLWD 140
            ..:.:..::..:::.|:|||::||.|.|.|.|.|::..:..:.....:|.:||:.. :..::..|
 Frog    82 TCRASTWMLKLYAMFLSIIFLVELIAAIVGLVFRHEIKNSFEQGYLQALKQYNATG-DPRSQAVD 145

  Fly   141 DIQDEFECCGVTSYNDW--ITAFPNGDLPISCCNVHVGAVGTFTCNNAQSSVADRHKVGCLDGFS 203
            .||...:||||.||::|  ...:....:|.|||.|        ..|.:::.:.|..|.|......
 Frog   146 TIQRTLQCCGVNSYSEWGQTQYYKTHGIPQSCCRV--------PGNCSEADMKDLGKAGGKVFKQ 202

  Fly   204 GYIS-AHAVSLGAAGVV------IAILQFFGVIFACYIAREI 238
            |.|| ...|.....|||      ||..|..|:..||.::|.|
 Frog   203 GCISLVTTVMESRMGVVAGISFGIACFQLVGMFLACCLSRYI 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp29FaNP_001162915.1 Tetraspannin 11..238 CDD:278750 69/235 (29%)
tetraspanin_LEL 106..210 CDD:239401 27/106 (25%)
tspan6NP_001039117.1 Tetraspannin 17..240 CDD:366035 68/231 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1145558at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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