DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp29Fa and cd63l

DIOPT Version :10

Sequence 1:NP_523515.1 Gene:Tsp29Fa / 34211 FlyBaseID:FBgn0032074 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_001037906.1 Gene:cd63l / 733515 XenbaseID:XB-GENE-22164536 Length:244 Species:Xenopus tropicalis


Alignment Length:224 Identity:70/224 - (31%)
Similarity:106/224 - (47%) Gaps:17/224 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 LIFLITGIILIAVGAGVGAVYTGYKLFLAGKFFSIPTFLIVIGSFIIIISFFGCWGALKENYCLV 84
            |:|.:||:.||.:||.|....|...:.|:......|..|.|.|..|.|:|.||....||||..|:
 Frog    22 LLFWVTGVALICLGATVQLRLTDISVVLSETSSGAPLVLTVTGIIIFIMSGFGAISVLKENNMLI 86

  Fly    85 LSFSVMLAIIFILELAAGISGYVLRNDASDLIKTSLTYSLNEYNSINPNATTKLWDDIQDEFECC 149
            .:|..::.:|||:|:..|||.|..|......|.......|::| .|:...|..| |..|.||.||
 Frog    87 KTFIGIMVVIFIIEIIVGISAYSYREKLQSDISRRFQQILSKY-GIDGQLTRSL-DYAQQEFRCC 149

  Fly   150 GVTSYNDW----ITAFPNGDLPISCCNVHVGAVGTFTCNNAQSSVADRHKV---GCLDGFSGYIS 207
            |..::.||    :|..|: .:|.|||.       ..|....:..:|.:..:   ||:.....:||
 Frog   150 GAQNFTDWMNVTVTLLPS-SVPKSCCR-------KVTPKCGEKVMAHQDNIFLEGCVIKMKTWIS 206

  Fly   208 AHAVSLGAAGVVIAILQFFGVIFACYIAR 236
            .|...:||.||.:..:|.||::.:..:.:
 Frog   207 QHIDVIGAVGVGLGFVQLFGILLSFLLVK 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp29FaNP_523515.1 Tetraspanin 11..236 CDD:459767 70/222 (32%)
tetraspanin_LEL 126..201 CDD:351888 23/81 (28%)
cd63lNP_001037906.1 Tetraspanin 13..235 CDD:459767 70/222 (32%)
tetraspanin_LEL 108..209 CDD:351888 29/110 (26%)

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