DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp29Fa and TSPAN6

DIOPT Version :9

Sequence 1:NP_001162915.1 Gene:Tsp29Fa / 34211 FlyBaseID:FBgn0032074 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_003261.1 Gene:TSPAN6 / 7105 HGNCID:11858 Length:245 Species:Homo sapiens


Alignment Length:236 Identity:68/236 - (28%)
Similarity:109/236 - (46%) Gaps:25/236 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 KYTLFGFNLIFLITGIILIAVGAGVGAVYTGYKLFLAGKFFSIPTFLIVIGSFIIIISFFGCWGA 76
            |..|..:..||.|||:||:|||.........|...|..|..::|..||..|:.||::..|||:..
Human    18 KSVLLIYTFIFWITGVILLAVGIWGKVSLENYFSLLNEKATNVPFVLIATGTVIILLGTFGCFAT 82

  Fly    77 LKENYCLVLSFSVMLAIIFILELAAGISGYVLRNDASDLIKTSLTYSLNEYNSINPNATTKLWDD 141
            .:.:..::..:::.|.::|::||.|.|.|:|.|::..:..|.:...:|.:|||.....:..: |.
Human    83 CRASAWMLKLYAMFLTLVFLVELVAAIVGFVFRHEIKNSFKNNYEKALKQYNSTGDYRSHAV-DK 146

  Fly   142 IQDEFECCGVTSYNDWITA--FPNGDLPISCCNVHVGAVGTFTCNNAQSSVADR-HKVGCLDGFS 203
            ||:...|||||.|.||...  :.....|.|||.:.       .|...:.  ||: :..||     
Human   147 IQNTLHCCGVTDYRDWTDTNYYSEKGFPKSCCKLE-------DCTPQRD--ADKVNNEGC----- 197

  Fly   204 GYISAHAVSLGAAGVV------IAILQFFGVIFACYIAREI 238
             :|....:.....|||      :|..|..|:..|..::|.|
Human   198 -FIKVMTIIESEMGVVAGISFGVACFQLIGIFLAYCLSRAI 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp29FaNP_001162915.1 Tetraspannin 11..238 CDD:278750 67/234 (29%)
tetraspanin_LEL 106..210 CDD:239401 28/106 (26%)
TSPAN6NP_003261.1 Tetraspannin 17..236 CDD:306775 66/233 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1145558at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
43.780

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