DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp29Fa and Tspan2

DIOPT Version :10

Sequence 1:NP_523515.1 Gene:Tsp29Fa / 34211 FlyBaseID:FBgn0032074 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_081809.2 Gene:Tspan2 / 70747 MGIID:1917997 Length:221 Species:Mus musculus


Alignment Length:248 Identity:66/248 - (26%)
Similarity:107/248 - (43%) Gaps:38/248 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSLLTGSANAVKYTLFGFNLIFLITGIILIAVGAGVGAVYTGYKLFLAGK---FFSIPTFLIV-I 61
            |....|....:||.|.||||:|.:.|..:||.|.......|...|....|   :|.:..:::| .
Mouse     1 MGRFRGGLRCIKYLLLGFNLLFWLAGSAVIAFGLWFRFGGTMKDLSSEDKSPEYFYVGLYVLVGA 65

  Fly    62 GSFIIIISFFGCWGALKENYCLVLSFSVMLAIIFILELAAGISGYVLRNDASDLIKTSLTYSLNE 126
            |:.::.:.||||.||::|:.|::.||...|.:||..|:..|:..::.::.|...:::....:.::
Mouse    66 GALMMTVGFFGCCGAMRESQCVLGSFFTCLLVIFAAEVTTGVFAFIGKDVAIRHVQSMYEEAYSD 130

  Fly   127 Y--NSINPNATTKLWDDIQDEFECCGVTSYNDWITAFPNGDLPISCCNVHVGAVGTFTCNNAQSS 189
            |  :....|.|...:   ...|:|||..|........|. :||                      
Mouse   131 YLKDRARGNGTLITF---HSAFQCCGKESSEQVQPTCPK-ELP---------------------- 169

  Fly   190 VADRHKVGCLDGFSGYISAHAVSLGAAGVVIAILQFFGVIFACYIAREIKIRN 242
               .|| .|:|.....|||....:|..|:.||.|..||:||:..:.  ..|||
Mouse   170 ---GHK-NCIDKIETVISAKLQLIGIVGIGIAGLTIFGMIFSMVLC--CAIRN 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp29FaNP_523515.1 Tetraspanin 11..236 CDD:459767 61/230 (27%)
tetraspanin_LEL 126..201 CDD:351888 14/76 (18%)
Tspan2NP_081809.2 Tetraspanin 11..212 CDD:459767 61/232 (26%)

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