DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp29Fa and Tspan11

DIOPT Version :9

Sequence 1:NP_001162915.1 Gene:Tsp29Fa / 34211 FlyBaseID:FBgn0032074 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_081019.1 Gene:Tspan11 / 68498 MGIID:1915748 Length:253 Species:Mus musculus


Alignment Length:239 Identity:69/239 - (28%)
Similarity:114/239 - (47%) Gaps:15/239 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 VKYTLFGFNLIFLITGIILIAVGAGVGAVYTGYKLFLAGKFFSIPTF-LIVIGSFIIIISFFGCW 74
            :||.||.||..|.:.|..::|||.......:||...||...|:...: ||.:|..::...|.|..
Mouse    16 LKYLLFIFNFFFWVGGAAVMAVGIWTLVEKSGYLSILASSTFAASAYILIFVGGLVMTTGFLGFG 80

  Fly    75 GALKENYCLVLSFSVMLAIIFILELAAGISGYVLRNDASDLIKTSLTYSLNEYNSINPNAT--TK 137
            ..::|....:.::..:|.:||::||.||:..:|.....||.:|..|..:|.|:.. .|.|.  |.
Mouse    81 AIIREQKSCLSTYFCLLLVIFLVELVAGVLAHVYYQRLSDELKWHLNSTLTEHYG-QPRAAEITA 144

  Fly   138 LWDDIQDEFECCGVTSYNDW------ITAFPNG-DLPISCCNVHVGAVGTFTCNNAQSSVADRHK 195
            ..|.:|.:|:|||..|..||      ::....| .:|.|||...|...|    ..|..|...:.:
Mouse   145 SVDRLQQDFKCCGSNSSADWQHSAYILSQEALGRQVPDSCCKTVVARCG----QRAHPSNIYKVE 205

  Fly   196 VGCLDGFSGYISAHAVSLGAAGVVIAILQFFGVIFACYIAREIK 239
            .||:.....:::.|.:.:||.|:.:|.||..|::..|.:.|.::
Mouse   206 GGCMAKLEQFVADHLLLMGAVGIGVACLQICGMVLTCCLHRRLQ 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp29FaNP_001162915.1 Tetraspannin 11..238 CDD:278750 69/236 (29%)
tetraspanin_LEL 106..210 CDD:239401 30/112 (27%)
Tspan11NP_081019.1 Tetraspannin 16..244 CDD:395265 68/232 (29%)
CD151_like_LEL 112..220 CDD:239408 30/112 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4418
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.840

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