DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp29Fa and Tsp42Ea

DIOPT Version :9

Sequence 1:NP_001162915.1 Gene:Tsp29Fa / 34211 FlyBaseID:FBgn0032074 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_525012.2 Gene:Tsp42Ea / 59178 FlyBaseID:FBgn0029508 Length:226 Species:Drosophila melanogaster


Alignment Length:240 Identity:74/240 - (30%)
Similarity:120/240 - (50%) Gaps:40/240 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 VKYTLFGFNLIFLITGIILIAVGAGVGAVYTGYKLFL-AGKFFSIPTFLIVIGSFIIIISFFGCW 74
            |||.||.|||:..|.||:||..||.:.:.......|. |.:...:|..:|::|:.|::||:|||.
  Fly     8 VKYILFIFNLLCSICGILLIVFGALLFSKVRNMDDFAEALRTQQVPVTMIILGTIILLISWFGCC 72

  Fly    75 GALKENYCLVLSFSVMLAIIFILELAAGISGYVLRNDASDLIKTSLTYSLNEYNSINPNATTKLW 139
            ||::|:||:.:::|::|.::.|.:||..|..:|.:               ::|..|..:...|.|
  Fly    73 GAIRESYCMSMTYSILLFVLMIGQLALVIYMWVQK---------------DKYLEIMGDVVEKAW 122

  Fly   140 ----------DDIQDEFECCGVTSYNDWITAFPNGDLPISCCNVHVGAVGTFTCNNAQSSVADRH 194
                      |.||...:|||.:.|.|:  |: .|..|.|||:         ..||.:.....|.
  Fly   123 NHRTSRSDYMDAIQISMKCCGRSGYTDY--AY-QGKFPPSCCS---------DTNNCRWETVYRR 175

  Fly   195 KVGCLDGFSGYISAHAVSLGAAGVVIAILQFFGVIFACYIAREIK 239
              ||...|..:...::..:..||:|||.::|.|.:|||.:|..|:
  Fly   176 --GCKVTFVEFWDRNSDIIKYAGLVIAAIEFVGFVFACCLANSIR 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp29FaNP_001162915.1 Tetraspannin 11..238 CDD:278750 73/237 (31%)
tetraspanin_LEL 106..210 CDD:239401 25/113 (22%)
Tsp42EaNP_525012.2 Tetraspannin 8..217 CDD:278750 73/237 (31%)
tetraspanin_LEL 104..188 CDD:239401 25/112 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45443014
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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