DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp29Fa and prph2a

DIOPT Version :10

Sequence 1:NP_523515.1 Gene:Tsp29Fa / 34211 FlyBaseID:FBgn0032074 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_571641.1 Gene:prph2a / 58085 ZFINID:ZDB-GENE-000616-8 Length:345 Species:Danio rerio


Alignment Length:271 Identity:56/271 - (20%)
Similarity:93/271 - (34%) Gaps:85/271 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 AVYTGYKLFLAGKFFSI-----------------PTFLIVIGSFIIIISFFG---CWGALKEN-- 80
            :|..|..:|..|.||.|                 |..||.:|.....::.||   |:.:|..:  
Zfish    27 SVMAGVLVFSMGLFFKIELRKRSELMDNNESHFVPNILIGVGLLACCLNAFGGKVCYDSLDSSKY 91

  Fly    81 ------------YCLVLSFSVML--AIIFILELAAGISGYVLRNDASDLIKTSLTYSLNEYNSIN 131
                        .|||.:|.:::  |:.|.:.:.       |....::.:|..:.|    |...:
Zfish    92 AKWKSIMTPFLICCLVFNFLLIVTAAMCFAMRIP-------LEFTLAEGLKNGMKY----YKDTD 145

  Fly   132 PNA---TTKLWDDIQDEFECCGVTSYNDW---------------------ITAFPNG-----DLP 167
            ...   ..:..|.:|.||.|||..:|.||                     |::..:|     .:|
Zfish   146 TPGRCYMKRTLDLMQMEFRCCGNNNYKDWFEIQWVSNRYLDFSAKEVKDRISSNVDGKYLMDGVP 210

  Fly   168 ISCCNVHV--GAVGTFTCNNAQSSVADRH-------KVGCLDGFSGYISAHAVSLGAAGVVIAIL 223
            .||||...  ..:.....||:.....|.:       |.||.|....|......::|...:::.:|
Zfish   211 FSCCNPSSPRPCIQQQITNNSAHYSYDHYTEDLNIWKRGCRDALVSYYGGMMNTIGVLVLLVTLL 275

  Fly   224 QFFGVIFACYI 234
            |...:|...||
Zfish   276 QSAVMIGLQYI 286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp29FaNP_523515.1 Tetraspanin 11..236 CDD:459767 56/271 (21%)
tetraspanin_LEL 126..201 CDD:351888 24/112 (21%)
prph2aNP_571641.1 Tetraspanin 16..>167 CDD:459767 30/150 (20%)
peripherin_like_LEL 120..262 CDD:239415 30/152 (20%)

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