DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp29Fa and cd81a

DIOPT Version :10

Sequence 1:NP_523515.1 Gene:Tsp29Fa / 34211 FlyBaseID:FBgn0032074 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_571593.2 Gene:cd81a / 58031 ZFINID:ZDB-GENE-000831-5 Length:236 Species:Danio rerio


Alignment Length:254 Identity:68/254 - (26%)
Similarity:116/254 - (45%) Gaps:45/254 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 GSANAVKYTLFGFNLIFLITGIILIAVGAGV-GAVYTGYKLFLAGKFFSIPT-------FLIVIG 62
            |....:||.||.||.||.:.|.:::.|...: ....|...|.|..:....||       .||.:|
Zfish     7 GCTKCIKYMLFFFNFIFWLAGCVILGVSLWLRHDTKTSSLLDLKYEGTESPTTFYISVYILIAVG 71

  Fly    63 SFIIIISFFGCWGALKENYCLVLSFSVMLAIIFILELAAGISGYVLRNDASDLI---KTSLTYSL 124
            :.::.:.|.||:||::|:.||:.:|...|.::|..|:||||.|::.::..|..:   ..|:....
Zfish    72 AVMMFVGFLGCYGAIQESQCLLGTFFACLVLLFACEVAAGIWGFMNKDKISKEVIGFYDSVYDKG 136

  Fly   125 NEYNSINPNATTKLWDDIQDEFECCG----VTSYND-WITAFPNGDLPISCCNVHVGAVGTFTCN 184
            ..||:.|.|..|.:.....:..:|||    .|:..| |:|         ..|..|:         
Zfish   137 ATYNTDNKNPATAVLKVFHETLQCCGKGNLFTAIVDRWLT---------DTCPEHL--------- 183

  Fly   185 NAQSSVADRH-KVGCLDGFSGYISAHAVSLGAAGVVIAILQFFGVIFACYIAREIKIRN 242
              :::..|.| ::..|  |:..||.    :|.|.:|:|::..|.:||:..:.  ..|||
Zfish   184 --RTNAVDCHTEIKNL--FTDKISL----IGIAALVVAVIMIFEMIFSMVLC--CGIRN 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp29FaNP_523515.1 Tetraspanin 11..236 CDD:459767 64/241 (27%)
tetraspanin_LEL 126..201 CDD:351888 17/80 (21%)
cd81aNP_571593.2 Tetraspanin 12..228 CDD:459767 64/243 (26%)

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