DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp29Fa and Tspan5

DIOPT Version :10

Sequence 1:NP_523515.1 Gene:Tsp29Fa / 34211 FlyBaseID:FBgn0032074 Length:248 Species:Drosophila melanogaster
Sequence 2:XP_006501799.1 Gene:Tspan5 / 56224 MGIID:1928096 Length:311 Species:Mus musculus


Alignment Length:219 Identity:64/219 - (29%)
Similarity:97/219 - (44%) Gaps:51/219 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 PTFL-IVIGSFIIIISFFGCWGALKENYCLVLSFSVMLAIIFILELAAGISGYVLRNDASDLIKT 118
            |.:| :|:|..:.|:.|.||.|||:||..|:..|||.|.|||.|||.||:..:|.:    |.||.
Mouse   104 PVWLFLVVGGVMFILGFAGCIGALRENTFLLKFFSVFLGIIFFLELTAGVLAFVFK----DWIKD 164

  Fly   119 SLTYSLNEYNSINPNATTKLWDDI---------QDEFECCGVTSYNDW-ITAFPN---------- 163
            .|.:.:|  |:|....     |||         |:.::|||....:|| :..:.|          
Mouse   165 QLYFFIN--NNIRAYR-----DDIDLQNLIDFTQEYWQCCGAFGADDWNLNIYFNCTDSNASRER 222

  Fly   164 GDLPISCC---------NVHVGAVGTFTCNNAQSSVADRHKV----GCLDGFSGYISAHAVSLGA 215
            ..:|.|||         |...|      .:..|....|:..|    ||:..|..::..:...:..
Mouse   223 CGVPFSCCTKDPAEDVINTQCG------YDARQKPEVDQQIVIYTKGCVPQFEKWLQDNLTIVAG 281

  Fly   216 AGVVIAILQFFGVIFACYIAREIK 239
            ..:.||:||.||:..|..:..:|:
Mouse   282 IFIGIALLQIFGICLAQNLVSDIE 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp29FaNP_523515.1 Tetraspanin 11..236 CDD:459767 63/214 (29%)
tetraspanin_LEL 126..201 CDD:351888 23/107 (21%)
Tspan5XP_006501799.1 Tetraspanin 72..301 CDD:459767 63/213 (30%)
TM4SF9_like_LEL 156..276 CDD:239412 30/136 (22%)

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