DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp29Fa and prph2b

DIOPT Version :10

Sequence 1:NP_523515.1 Gene:Tsp29Fa / 34211 FlyBaseID:FBgn0032074 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_571642.1 Gene:prph2b / 559209 ZFINID:ZDB-GENE-000616-9 Length:342 Species:Danio rerio


Alignment Length:285 Identity:57/285 - (20%)
Similarity:94/285 - (32%) Gaps:103/285 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 AVYTGYKLFLAGKFFSI-----------------PTFLIVIGSFIIIISFFG---C--------- 73
            :|..|..:|..|.|..|                 |..||::|.....::.||   |         
Zfish    27 SVMAGILIFSTGIFLKIELRKRSEMMDNNESHFVPNLLILVGLVACGVNTFGGKVCHDSLDTVKF 91

  Fly    74 --WGALKENY-------CLVLSFSVMLAIIFILELAAGISGYVLRNDASDLIKTSLTYSLNEYNS 129
              |..:.:.|       |:||..:.:|.  |:::::       |....::.:|..:.|    |..
Zfish    92 TKWKTMLKAYMSGCVIFCIVLFVTALLC--FLMQIS-------LHFALAEGLKNGMKY----YKD 143

  Fly   130 INPNA---TTKLWDDIQDEFECCGVTSYNDWITA---------FPNGDL---------------- 166
            .:...   ..:..|..|.||.|||..:|.||...         |.|.::                
Zfish   144 TDTPGRCFMKRTLDMTQIEFRCCGNNNYKDWFEIQWISNRYLDFSNDEIKDRVQSNVEGKFLMDS 208

  Fly   167 -PISCCNV---------HVGAVGTFTCNNAQSSVADRHKV-------GCLDGFSGYISAHAVSLG 214
             |.||||.         |:      |.|:|..|. |.|..       ||.:....|......|:|
Zfish   209 VPFSCCNPGSPRPCIQHHL------TNNSAHYSY-DHHTEDLNVWTRGCREALVSYYGGMMNSIG 266

  Fly   215 AAGVVIAILQFFGVIFACYIAREIK 239
            |..::..|:|....:...|::..::
Zfish   267 AFVLLFIIMQAVVTVGLQYLSTSLE 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp29FaNP_523515.1 Tetraspanin 11..236 CDD:459767 57/280 (20%)
tetraspanin_LEL 126..201 CDD:351888 27/119 (23%)
prph2bNP_571642.1 Tetraspanin 16..>167 CDD:459767 29/152 (19%)
peripherin_like_LEL 120..262 CDD:239415 32/159 (20%)

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