DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp29Fa and tspan9a

DIOPT Version :10

Sequence 1:NP_523515.1 Gene:Tsp29Fa / 34211 FlyBaseID:FBgn0032074 Length:248 Species:Drosophila melanogaster
Sequence 2:XP_073785985.1 Gene:tspan9a / 555341 ZFINID:ZDB-GENE-060503-632 Length:336 Species:Danio rerio


Alignment Length:244 Identity:78/244 - (31%)
Similarity:119/244 - (48%) Gaps:11/244 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SLLTGSANAVKYTLFGFNLIFLITGIILIAVGAGVGAVYTGYKLFLAGKF--FSIPTFLIVIGSF 64
            ::..|....:||.:|.|||||.:.|..|:.||..:......:..| :..|  .|....:|.||:.
Zfish    97 NMARGCLCCLKYMMFVFNLIFWLCGCGLLGVGIWLSVSQGSFATF-SPSFPSLSAANMVIAIGAI 160

  Fly    65 IIIISFFGCWGALKENYCLVLSFSVMLAIIFILELAAGISGYVLRNDASDLIKTSLTYSLNEYNS 129
            :::..|.||.||:|||.||:|||.::|.||.:.||...|..:|..:..|:..|..|...|..||:
Zfish   161 VMVTGFLGCLGAIKENKCLLLSFFIVLLIILLAELILLILFFVYSDKVSENAKQDLKDGLALYNT 225

  Fly   130 INPNATTKLWDDIQDEFECCGVTSYNDWITAFPNGDLPISCCNVHVGAVGTFTCNNAQSSVADRH 194
            .|.......|:.||.|::|||||.|.||..|.....:|..||..|....|    .|:.:....| 
Zfish   226 DNNIGLRNAWNIIQAEWKCCGVTGYTDWHDALKEKVVPDRCCQEHYQECG----RNSTNMFWTR- 285

  Fly   195 KVGCLDGFSGYISAHAVSLGAAGVVIAILQFFGVIFACYIAREIKIRNG 243
              ||.:....::..:...||..|:.|.::|..|:.|:..:..:|. |:|
Zfish   286 --GCYEKVEEWLEDNKHLLGTIGMCILVVQLLGMAFSMTLFHQIH-RSG 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp29FaNP_523515.1 Tetraspanin 11..236 CDD:459767 74/226 (33%)
tetraspanin_LEL 126..201 CDD:351888 25/74 (34%)
tspan9aXP_073785985.1 None

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