DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp29Fa and zgc:110329

DIOPT Version :10

Sequence 1:NP_523515.1 Gene:Tsp29Fa / 34211 FlyBaseID:FBgn0032074 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_001017802.1 Gene:zgc:110329 / 550500 ZFINID:ZDB-GENE-050417-334 Length:346 Species:Danio rerio


Alignment Length:260 Identity:60/260 - (23%)
Similarity:107/260 - (41%) Gaps:63/260 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 VKYTLFGFNLIFLITGIILIAVGAGVGAVYTGYK----LFLAGKFFSIPTFLIVIGSFIIIISFF 71
            :|::|..::::|.:.|:.::.:|     ||...:    ..|.|.|.:....||::|..:..:|..
Zfish    17 LKFSLNVYSMLFSLLGLYVLCIG-----VYAEVERQKNRTLEGVFLAPAVVLILLGLVMFTVSVI 76

  Fly    72 GCWGALKENYCLVLSFSVMLAIIFILELAAGISGYVLRNDASDLIKTSLTYSLNEYNSINPNATT 136
            |..|:|::|..|:..|..:|.::..|:..|.|...:.......|.:.|:...:..|         
Zfish    77 GMVGSLRDNKTLLHMFLCVLCVLLALQAIALIIALIFEKTTIKLFQNSIREGIKHY--------- 132

  Fly   137 KLWDD---------IQDEFECCGVTSYNDW-ITAFPNGD--------LPISCC-NVHVGAVGTFT 182
              :||         :|::|.|||...|.|| :..:...|        :|.:|| ...||.|....
Zfish   133 --YDDLDFKNILDYVQEKFSCCGGDEYKDWEVNQYHLCDGKSPLACGVPYTCCIRQSVGEVVNTL 195

  Fly   183 CN----NAQSSVADR--HKVGCLDGFSGYISAHAVSL------GAA-GV--VIAILQFFGVIFAC 232
            |.    :.|....|.  |..||:         |||:|      ||. |:  .:.:.|..|::.:|
Zfish   196 CGYKTLHQQREALDGVIHVRGCI---------HAVNLWMGDNIGATIGICCAVGLPQLLGILLSC 251

  Fly   233  232
            Zfish   252  251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp29FaNP_523515.1 Tetraspanin 11..236 CDD:459767 60/260 (23%)
tetraspanin_LEL 126..201 CDD:351888 24/99 (24%)
zgc:110329NP_001017802.1 Tetraspanin 17..255 CDD:459767 60/260 (23%)
penumbra_like_LEL 111..229 CDD:239411 30/137 (22%)

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