DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp29Fa and tspan14

DIOPT Version :10

Sequence 1:NP_523515.1 Gene:Tsp29Fa / 34211 FlyBaseID:FBgn0032074 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_001007871.1 Gene:tspan14 / 493257 XenbaseID:XB-GENE-868280 Length:270 Species:Xenopus tropicalis


Alignment Length:263 Identity:69/263 - (26%)
Similarity:114/263 - (43%) Gaps:57/263 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 KYTLFGFNLIFLITGIILIAVG------AGVGAVYT------GYKLFLAGKFFSIPTFLI-VIGS 63
            ||.||.:|:||.::|::|:.||      .|:.:..|      |:.          |.:|: |:|.
 Frog    16 KYLLFSYNIIFWLSGMVLLGVGLWAWSEKGILSDITKVTRLHGFD----------PVWLVLVVGV 70

  Fly    64 FIIIISFFGCWGALKENYCLVLSFSVMLAIIFILELAAGISGYVLRNDASDLIKTSLTYSLNEY- 127
            .:..:.|.||.|||:||.||:..|...:.:||.:|||..:..::.::...|..|.....::..| 
 Frog    71 IMFTLGFAGCVGALRENICLLKFFCGAIVLIFFMELAVAVLAFLFQDWVKDRAKDFFENNIKSYR 135

  Fly   128 NSINPNATTKLWDDIQDEFECCGVTSYNDW-ITAFPNGD----------LPISCCNVHVGAVGTF 181
            :.|:   ...|.|.:|...:|||..|.:|| :..:.|..          :|.|||......    
 Frog   136 DDID---LQNLIDSLQKANQCCGAVSPDDWDLNEYFNCSVENPSRERCGVPFSCCVPDPAQ---- 193

  Fly   182 TCNNAQSSVADRHK-----------VGCLDGFSGYISAHAVSLGAAGVVIAILQFFGVIFACYIA 235
            |..|.|.....|.|           .||:.....::..:...:....:||:|||.||:    |:|
 Frog   194 TVVNTQCGYDARRKKPNERPNTTFSKGCISALEAWLPRNIYIVAGVFLVISILQIFGI----YLA 254

  Fly   236 REI 238
            |.:
 Frog   255 RTL 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp29FaNP_523515.1 Tetraspanin 11..236 CDD:459767 67/259 (26%)
tetraspanin_LEL 126..201 CDD:351888 23/97 (24%)
tspan14NP_001007871.1 Tetraspanin 16..257 CDD:459767 69/261 (26%)
TM4SF9_like_LEL 113..233 CDD:239412 25/126 (20%)

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