DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp29Fa and cd81b

DIOPT Version :10

Sequence 1:NP_523515.1 Gene:Tsp29Fa / 34211 FlyBaseID:FBgn0032074 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_001003735.1 Gene:cd81b / 445280 ZFINID:ZDB-GENE-040808-52 Length:238 Species:Danio rerio


Alignment Length:273 Identity:75/273 - (27%)
Similarity:115/273 - (42%) Gaps:75/273 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LTGSANAVKYTLFGFNLIFLITGIILIAVGAGVGAVY------TGYKLFL-------AGKFFSIP 55
            :||.:..:||.||..|.||.:.|.:::.|     |::      |...|.|       .|.|:...
Zfish     3 VTGCSQCIKYMLFFLNFIFWLAGGVILGV-----ALWLRHDSQTSNLLMLQFEGNQAPGTFYISV 62

  Fly    56 TFLIVIGSFIIIISFFGCWGALKENYCLVLSFSVMLAIIFILELAAGISGYVLRNDASDLIKTSL 120
            ..||.||:.::.:.|.||:||::|:.||:.:|...|.|:|..|:||||.|::.|    |.|.|.|
Zfish    63 YVLIAIGAIMMFVGFLGCYGAIQESQCLLGTFFTCLVILFACEVAAGIWGFINR----DTISTEL 123

  Fly   121 TYSLNEYN-----SINPNATT------KLWDDIQDEFECCGVTSYNDWI----------TAFPNG 164
               :|.|:     :::|..||      |:.:...|..:|||....||..          ..||..
Zfish   124 ---INFYDAAYIKAVDPVDTTSRQTASKVLEVFHDNLDCCGKGDDNDLFKVVQTSLCPKKTFPLD 185

  Fly   165 DLPISCCNVHVGAVGTFTCNNAQSSVADRHKVGCLDGFSGYISAHAVSLGAAGVVIAILQFFGVI 229
            .|....|:|.:        .|..|.                 ..|.:  |.|.:|||::..|.:|
Zfish   186 PLISQSCHVKL--------RNLFSE-----------------KLHVI--GLAALVIAVIMVFEMI 223

  Fly   230 FACYIAREIKIRN 242
            |...:.  ..|||
Zfish   224 FTMVLC--CAIRN 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp29FaNP_523515.1 Tetraspanin 11..236 CDD:459767 70/258 (27%)
tetraspanin_LEL 126..201 CDD:351888 18/95 (19%)
cd81bNP_001003735.1 Tetraspanin 10..230 CDD:459767 70/260 (27%)

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