DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp29Fa and tspan36

DIOPT Version :10

Sequence 1:NP_523515.1 Gene:Tsp29Fa / 34211 FlyBaseID:FBgn0032074 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_001002748.1 Gene:tspan36 / 437021 ZFINID:ZDB-GENE-040718-248 Length:243 Species:Danio rerio


Alignment Length:241 Identity:70/241 - (29%)
Similarity:113/241 - (46%) Gaps:28/241 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 KYTLFGFNLIFLITGIILIAVGAGVGAVYTGYKLFLAGKFFSIPTFLIV-IGSFIIIISFFGCWG 75
            |..|...:|||...|..|..||:.|...|..::.|::.:...||..:|: :...:.||.|.||..
Zfish     9 KTILLLLSLIFWAAGAALAYVGSYVIKSYNNFEDFMSDRHTLIPAAIIIGVAVVMFIIGFVGCCA 73

  Fly    76 ALKENYCLVLSFSVMLAIIFILELAAGISGYVLRNDASDLIKTSLTYSLNE----YNSINPNATT 136
            .|:|:...:..|.:::.:||..|:.|.:.|.:.|.    .|:..|..|:|:    |:.:  |:.|
Zfish    74 TLRESKVGLGLFLIIIMLIFAAEVTAFVFGIIYRG----RIRGDLEKSMNDVFLKYDGL--NSET 132

  Fly   137 KLWDDIQDEFECCGVTSYNDW-ITAF---PNGDLPISCCNVHV----GAVGTFTCNNAQSSVADR 193
            ...|.:|.:.|||||.:..|| :|::   .|..:|.|||..::    |.:......|.|...|..
Zfish   133 HAVDYLQSQLECCGVKNQTDWTLTSWFAQHNNTVPQSCCKANMTQCTGQLSQPDLLNTQGCEAKL 197

  Fly   194 HKVGCLDGFSGYISAHAVSLGAAGVVIAILQFFGVIFACYIAREIK 239
            .:|  |.....|  |..|.||     .||::|||::..|.|..:.|
Zfish   198 EQV--LQDVLSY--AMLVILG-----FAIIKFFGMLSVCVITCKSK 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp29FaNP_523515.1 Tetraspanin 11..236 CDD:459767 69/236 (29%)
tetraspanin_LEL 126..201 CDD:351888 24/86 (28%)
tspan36NP_001002748.1 Tetraspanin 8..231 CDD:459767 69/236 (29%)
TM4SF8_like_LEL 103..206 CDD:239416 30/110 (27%)

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